RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 CCDC153Q494R4 210 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 TEX44Q53QW1 395 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 LCLAT1Q6UWP7 414 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 HACE1Q8IYU2 909 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 DEFB107AQ8IZN7 70 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 TNS4Q8IZW8 715 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 MARVELD2Q8N4S9 558 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PIWIL2Q8TC59 973 aaKnown RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 HPS1Q92902 700 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PLEKHA8Q96JA3 519 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 EHD1Q9H4M9 534 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 GBA2Q9HCG7 927 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 POU2F3Q9UKI9 436 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 AP4E1Q9UPM8 1137 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 HES2Q9Y543 173 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 EVPLQ92817 2033 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 BCLAF3A2AJT9 711 aaKnown RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 TRIM64CA6NLI5 447 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 ERVK-10P10266 1014 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PABPC1P11940 636 aaKnown RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 GOT1P17174 413 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 TYK2P29597 1187 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 ITGADQ13349 1161 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 NEPROQ6NW34 567 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 C10orf107Q8IVU9 208 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 TSPAN14Q8NG11 270 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CYP3A43Q9HB55 503 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 PRMT7Q9NVM4 692 aaPredicted RBP16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 SOX13Q9UN79 622 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 CDC14AQ9UNH5 594 aa16.29■□□□□ 0.2
SYNCRIP-202ENST00000369622 USP12O75317 370 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 SAT1P21673 171 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 MRPS22P82650 360 aaKnown RBP16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 VGLL4Q14135 290 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 DEPDC1Q5TB30 811 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 ZNF534Q76KX8 674 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 CCDC106Q9BWC9 280 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 SMARCAD1Q9H4L7 1026 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 POMPQ9Y244 141 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 CCDC78A2IDD5 438 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 SERPINA6P08185 405 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 PIM1P11309 404 aaPredicted RBP16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 CMC1Q7Z7K0 106 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 LZTR1Q8N653 840 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 CCDC185Q8N715 623 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 CDKL2Q92772 493 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 PGBD4Q96DM1 585 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 MOCOSQ96EN8 888 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 FRMD8Q9BZ67 464 aaPredicted RBP16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 KLHL25Q9H0H3 589 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 PDZD7Q9H5P4 517 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 THEGQ9P2T0 379 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 DNAJB4Q9UDY4 337 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 PRELID1Q9Y255 219 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 N6AMT1Q9Y5N5 214 aa16.28■□□□□ 0.2
SYNCRIP-202ENST00000369622 IGKV6-21A0A0C4DH24 114 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 FAM159BA6NKW6 160 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 GAS2O43903 313 aaKnown RBP16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 CCDC130P13994 396 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 UGT1A6P19224 532 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 UGT1A1P22309 533 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 UGT1A4P22310 534 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 UGT1A3P35503 534 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 UGT1A5P35504 534 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 NKX2-5P52952 324 aaPredicted RBP16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 BNIP3Q12983 259 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 KCNJ8Q15842 424 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 FAM209AQ5JX71 171 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 RIOX2Q8IUF8 465 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 DPEP3Q9H4B8 488 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 Q9H521 79 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 XPNPEP3Q9NQH7 507 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 GPRC5DQ9NZD1 345 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 ITGB1BP2Q9UKP3 347 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 HBP1O60381 514 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 ALDOAP04075 364 aaKnown RBP16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 CD247P20963 164 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 S100A1P23297 94 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 NDST2P52849 883 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 GNA12Q03113 381 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 SLC9A4Q6AI14 798 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 DCPSQ96C86 337 aaKnown RBP16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 LRGUKQ96M69 825 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 MOSPD1Q9UJG1 213 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 PCDHGA3Q9Y5H0 932 aa16.27■□□□□ 0.2
SYNCRIP-202ENST00000369622 PHIPQ8WWQ0 1821 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 GOLGA8TH3BQL2 631 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 PSMD12O00232 456 aaPredicted RBP16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 ZNF286BP0CG31 522 aa16.27■□□□□ 0.19
SYNCRIP-202ENST00000369622 ATICP31939 592 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms