RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 F11P03951 625 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 RHOXF2BP0C7M4 288 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CSH1P0DML2 217 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CSH2P0DML3 217 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 IVDP26440 423 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 YWHAQP27348 245 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 ECHS1P30084 290 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 AVPR1AP37288 418 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SULT1E1P49888 294 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 DNA2P51530 1060 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 NRLP54845 237 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CDH6P55285 790 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 RNASE9P60153 205 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 DEUP1Q05D60 604 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 BYSLQ13895 437 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 CCINQ13939 588 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 PAFAH1B3Q15102 231 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 NOMO1Q15155 1222 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 DGKKQ5KSL6 1271 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SH3PXD2AQ5TCZ1 1133 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 BTBD8Q5XKL5 378 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 LAIR1Q6GTX8 287 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 FSTL4Q6MZW2 842 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 AADACL2Q6P093 401 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 TTC27Q6P3X3 843 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 ANKS1BQ7Z6G8 1248 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 TADA2BQ86TJ2 420 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 LRRC49Q8IUZ0 686 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CCDC50Q8IVM0 306 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 CELF5Q8N6W0 485 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 DQX1Q8TE96 717 aaKnown RBP9.05□□□□□ -0.96
SNX27-201ENST00000368838 FATE1Q969F0 183 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 CYP2S1Q96SQ9 504 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 RHOXF2Q9BQY4 288 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 FUT8Q9BYC5 575 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNX27-201ENST00000368838 FAM53CQ9NYF3 392 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 SMARCAL1Q9NZC9 954 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 AP4E1Q9UPM8 1137 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 TLR6Q9Y2C9 796 aa9.05□□□□□ -0.96
SNX27-201ENST00000368838 BCLAF3A2AJT9 711 aaKnown RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 ANTXRLA6NF34 631 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 KCNU1A8MYU2 1149 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 H3BRJ5 948 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 AXIN1O15169 862 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 TTI1O43156 1089 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 CST8O60676 142 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 GRAP2O75791 330 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 FGF19O95750 216 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 NCAM1P13591 858 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 CCR1P32246 355 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ARL4AP40617 200 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 MAGEA6P43360 314 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ATP11AP98196 1134 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 RUNX3Q13761 415 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 C5orf22Q49AR2 442 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ANKRD20A8PQ5CZ79 823 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 EFHC2Q5JST6 749 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 MANEALQ5VSG8 457 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 LONP2Q86WA8 852 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 KLHL7Q8IXQ5 586 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 PHTF2Q8N3S3 785 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 LZTR1Q8N653 840 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ALLCQ8N6M5 410 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 PQLC3Q8N755 202 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 PLD5Q8N7P1 536 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 KIAA1958Q8N8K9 716 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 PCDH19Q8TAB3 1148 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ACTL9Q8TC94 416 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 MRPS31Q92665 395 aaKnown RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 HAUS1Q96CS2 278 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 CNTNAP3BQ96NU0 1288 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 OLFM3Q96PB7 478 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 CSPG4P5Q96PW8 444 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 HHIPQ96QV1 700 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 FAM83CQ9BQN1 747 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 FRMD8Q9BZ67 464 aaPredicted RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 SMOC1Q9H4F8 434 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ZWILCHQ9H900 591 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 PCDH9Q9HC56 1237 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 TLR8Q9NR97 1041 aaKnown RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 SEMA4GQ9NTN9 838 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 PIGVQ9NUD9 493 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 ZDHHC18Q9NUE0 388 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNX27-201ENST00000368838 THG1LQ9NWX6 298 aaKnown RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 UXTQ9UBK9 157 aaPredicted RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNX27-201ENST00000368838 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 NAALADL1Q9UQQ1 740 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 HBS1LQ9Y450 684 aaKnown RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 WNT6Q9Y6F9 365 aa9.04□□□□□ -0.96
SNX27-201ENST00000368838 V9GYY5 206 aaPredicted RBP9.04□□□□□ -0.96
SNX27-201ENST00000368838 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms