RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ZNF862O60290 1169 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 SNX3O60493 162 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 KCTD19Q17RG1 926 aaPredicted RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 TTC27Q6P3X3 843 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 CEP44Q9C0F1 390 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 DHX33Q9H6R0 707 aaKnown RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 TRIM45Q9H8W5 580 aaPredicted RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 ERVK-5Q9HDB9 667 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 MGRN1O60291 552 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 TPST1O60507 370 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 TPBGLP0DKB5 382 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 CDK5RAP1Q96SZ6 601 aaKnown RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 ZNF670Q9BS34 389 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 DMAC2Q9NW81 257 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 A0A087WXM4 84 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 FKBP9O95302 570 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 C4BPAP04003 597 aaKnown RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 SKIV2L2P42285 1042 aaKnown RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 NR1D2Q14995 579 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 RBM44Q6ZP01 1051 aaKnown RBP13.49□□□□□ -0.25
PTPRK-204ENST00000368210 FKBP9P1Q75LS8 142 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 ECSITQ9BQ95 431 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 TRIM39Q9HCM9 518 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 DMTF1Q9Y222 760 aa13.49□□□□□ -0.25
PTPRK-204ENST00000368210 EVPLLA8MZ36 301 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PSMB4P28070 264 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 EPHB3P54753 998 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 NAB1Q13506 487 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PTPN20Q4JDL3 420 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ZC3H12AQ5D1E8 599 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 KYAT3Q6YP21 454 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 RRM2BQ7LG56 351 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 LRRC57Q8N9N7 239 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 VPS37AQ8NEZ2 397 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 OXNAD1Q96HP4 312 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 RBBP8Q99708 897 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 C17orf80Q9BSJ5 609 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 NIFKQ9BYG3 293 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ABCC13Q9NSE7 274 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 SERPIND1P05546 499 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 CDH2P19022 906 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PPP3CCP48454 512 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 GRIK3Q13003 919 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ARMCX4Q5H9R4 360 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ZCCHC23Q6ZST2 131 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 SLC22A9Q8IVM8 553 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PHF21BQ96EK2 531 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 MAGED4Q96JG8 741 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 TEX12Q9BXU0 123 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PDGFDQ9GZP0 370 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ALBP02768 609 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 WASHC5Q12768 1159 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 LPIN1Q14693 890 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PDCD4Q53EL6 469 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 DEFB128Q7Z7B8 93 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PSTKQ8IV42 348 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 TRPC4APQ8TEL6 797 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PRDM12Q9H4Q4 367 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 SCN3BQ9NY72 215 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ATP6V1HQ9UI12 483 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 COG5Q9UP83 839 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 TELO2Q9Y4R8 837 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 V9GYQ6 96 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 FECHP22830 423 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 CRABP2P29373 138 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 CDK7P50613 346 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 MYO1HQ8N1T3 1032 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PPTC7Q8NI37 304 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 FAM162AQ96A26 154 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 C18orf25Q96B23 403 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 TMEM237Q96Q45 408 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 THUMPD3Q9BV44 507 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 ATP13A1Q9HD20 1204 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 TRIM17Q9Y577 477 aa13.48□□□□□ -0.25
PTPRK-204ENST00000368210 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
PTPRK-204ENST00000368210 PRR23D1E9PI22 279 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 TRIM24O15164 1050 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 PGK1P00558 417 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 PRR23D2P0DMB1 279 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 CYP2C18P33260 490 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 SLC35G1Q2M3R5 365 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 EXOC3L1Q86VI1 746 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 TBL1YQ9BQ87 522 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 CHID1Q9BWS9 393 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
PTPRK-204ENST00000368210 EIF3LQ9Y262 564 aaKnown RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 FAM32AQ9Y421 112 aaKnown RBP13.47□□□□□ -0.25
PTPRK-204ENST00000368210 CBX6O95503 412 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms