RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 SCML1Q9UN30 329 aa17.32■□□□□ 0.36
CKLF-204ENST00000362093 EIF3CLB5ME19 914 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 K7ERQ8 282 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 RNASEH1O60930 286 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 LRCH4O75427 683 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 DNTTP04053 509 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 HTR7P34969 479 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 ZNF33AQ06730 810 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 SLC20A2Q08357 652 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 PIGHQ14442 188 aaPredicted RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 CA9Q16790 459 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 ACCSLQ4AC99 568 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 PRR23CQ6ZRP0 262 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 CYP2U1Q7Z449 544 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 CACUL1Q86Y37 369 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 CNGA4Q8IV77 575 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 MMAAQ8IVH4 418 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 RTL3Q8N8U3 475 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 EIF3CQ99613 913 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 EPAS1Q99814 870 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 SPON2Q9BUD6 331 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 SNRNP25Q9BV90 132 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 MAGEH1Q9H213 219 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 DEF6Q9H4E7 631 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 ATP13A1Q9HD20 1204 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 VPS45Q9NRW7 570 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 IP6K2Q9UHH9 426 aa17.31■□□□□ 0.36
CKLF-204ENST00000362093 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
CKLF-204ENST00000362093 CXorf51AA0A1B0GTR3 108 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 AKR1B10O60218 316 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 CD160O95971 181 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ACVRL1P37023 503 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ETFBP38117 255 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ZNF75DP51815 510 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ARF5P84085 180 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ELAVL3Q14576 367 aaKnown RBP17.3■□□□□ 0.36
CKLF-204ENST00000362093 DAB2IPQ5VWQ8 1189 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 PEAR1Q5VY43 1037 aaPredicted RBP17.3■□□□□ 0.36
CKLF-204ENST00000362093 LYSMD4Q5XG99 296 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 IL31Q6EBC2 164 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 LINGO4Q6UY18 593 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 SYT12Q8IV01 421 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 NIPA2Q8N8Q9 360 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 TC2NQ8N9U0 490 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ATP11CQ8NB49 1132 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 CADM4Q8NFZ8 388 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 PIGKQ92643 395 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 MRFAP1L1Q96HT8 127 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 BTBD6Q96KE9 485 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 CCDC42Q96M95 316 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 GPR174Q9BXC1 333 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 PACSIN1Q9BY11 444 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 PABPC3Q9H361 631 aaKnown RBP17.3■□□□□ 0.36
CKLF-204ENST00000362093 SMOC1Q9H4F8 434 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 DHX35Q9H5Z1 703 aaKnown RBP17.3■□□□□ 0.36
CKLF-204ENST00000362093 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
CKLF-204ENST00000362093 CATSPERBQ9H7T0 1116 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 TMEM74BQ9NUR3 256 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 PILRBQ9UKJ0 227 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 AP4E1Q9UPM8 1137 aa17.3■□□□□ 0.36
CKLF-204ENST00000362093 MYO1FO00160 1098 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 CBX4O00257 560 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 MCF2LO15068 1137 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 SMAD6O43541 496 aaKnown RBP17.29■□□□□ 0.36
CKLF-204ENST00000362093 FOXD2O60548 495 aaPredicted RBP17.29■□□□□ 0.36
CKLF-204ENST00000362093 H2AFZP0C0S5 128 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 ITPKAP23677 461 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 IL1R2P27930 398 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 SLC8A1P32418 973 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 ACSL1P33121 698 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 CLCN6P51797 869 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 POLD3Q15054 466 aaPredicted RBP17.29■□□□□ 0.36
CKLF-204ENST00000362093 SF3A2Q15428 464 aaKnown RBP17.29■□□□□ 0.36
CKLF-204ENST00000362093 CST6Q15828 149 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 BOLA3Q53S33 107 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 RETSATQ6NUM9 610 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 Q6ZVU0 165 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 USP30Q70CQ3 517 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 H2AFVQ71UI9 128 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 ARMCX6Q7L4S7 300 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 FAM124AQ86V42 546 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 PPM1HQ9ULR3 514 aa17.29■□□□□ 0.36
CKLF-204ENST00000362093 RALGAPA1Q6GYQ0 2036 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 METTL12A8MUP2 240 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 ALOX15BO15296 676 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 MID1O15344 667 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 FGF10O15520 208 aaPredicted RBP17.28■□□□□ 0.36
CKLF-204ENST00000362093 KDELR3O43731 214 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 RAMP2O60895 175 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 ZNF821O75541 412 aaPredicted RBP17.28■□□□□ 0.36
CKLF-204ENST00000362093 TCF4P15884 667 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 C5AR1P21730 350 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 DPP6P42658 865 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 HCAR3P49019 387 aa17.28■□□□□ 0.36
CKLF-204ENST00000362093 SERPINH1P50454 418 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms