RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 GPR65Q8IYL9 337 aa14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 NUP93Q8N1F7 819 aa14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 ACSS3Q9H6R3 686 aa14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 TMPRSS4Q9NRS4 437 aa14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 ABCC13Q9NSE7 274 aa14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 TEX264Q9Y6I9 313 aa14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 ZNF638Q14966 1978 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-201ENST00000359867 NCAM2O15394 837 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 MFSD11O43934 449 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 BANF1O75531 89 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 HHATQ5VTY9 493 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 ADAM32Q8TC27 787 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 WDR83Q9BRX9 315 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 GREB1Q4ZG55 1949 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 XIRP2A4UGR9 3374 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 A0A0A0MRY4 1105 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 POC1B-GALNT4F8VUJ3 575 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 LPXNO60711 386 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 GLUD1P00367 558 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 IGLV3-25P01717 112 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 ELK3P41970 407 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 MSH2P43246 934 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 TUFMP49411 452 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 TPI1P60174 286 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 SMAD3P84022 425 aaKnown RBP14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 CDK16Q00536 496 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 TWF1Q12792 350 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 RIPK1Q13546 671 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 SEMA5AQ13591 1074 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 LILRA6Q6PI73 481 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 ARHGEF18Q6ZSZ5 1173 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 EDEM1Q92611 657 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 SPATA13Q96N96 652 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 BRD8Q9H0E9 1235 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 PSMC3IPQ9P2W1 217 aaPredicted RBP14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 MFHAS1Q9Y4C4 1052 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 INSL5Q9Y5Q6 135 aa14.18□□□□□ -0.14
CSNK1E-201ENST00000359867 AHCYL1O43865 530 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 GSTA2P09210 222 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 EPCAMP16422 314 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 SSTR1P30872 391 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 PAPOLAP51003 745 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 YWHAGP61981 247 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 RPL10AP62906 217 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 EIF4EBP2Q13542 120 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 ANKRD20A2Q5SQ80 823 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 ANKRD20A1Q5TYW2 823 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 TCEAL8Q8IYN2 117 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 KREMEN2Q8NCW0 462 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 DQX1Q8TE96 717 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 DHRS4Q9BTZ2 278 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 OSBPL2Q9H1P3 480 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 NKIRAS1Q9NYS0 192 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 CORO1CQ9ULV4 474 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 RASA4BC9J798 803 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 MAP3K13O43283 966 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 RASA4O43374 803 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 OPHN1O60890 802 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 METTL18O95568 372 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 APRTP07741 180 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 VAV1P15498 845 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 ERCC2P18074 760 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 ALDH1A3P47895 512 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 CLCN4P51793 760 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 BRMS1LQ5PSV4 323 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 TAC4Q86UU9 113 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 TRABD2AQ86V40 505 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 FBF1Q8TES7 1133 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 TMEM237Q96Q45 408 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 TKTL2Q9H0I9 626 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 ANLNQ9NQW6 1124 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 NUDT5Q9UKK9 219 aa14.17□□□□□ -0.14
CSNK1E-201ENST00000359867 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 SLC38A8A6NNN8 435 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 FAM72CH0Y354 149 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 C8AP07357 584 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 MAGEA3P43357 314 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 SLC18A1P54219 525 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 FAM72AQ5TYM5 149 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 BTBD8Q5XKL5 378 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 FAM72DQ6L9T8 149 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 ADGRD1Q6QNK2 874 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 CAND1Q86VP6 1230 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 FAM72BQ86X60 149 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 SLC22A17Q8WUG5 538 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 CYTH2Q99418 400 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 LGMNQ99538 433 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 XAB2Q9HCS7 855 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 KLHL14Q9P2G3 628 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 PRKAG3Q9UGI9 489 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 CHMP2BQ9UQN3 213 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 I6L893 689 aaPredicted RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 CLASP2O75122 1294 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 TAC1P20366 129 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 HTR7P34969 479 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 WDR4P57081 412 aaKnown RBP14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 TAF10Q12962 218 aa14.16□□□□□ -0.14
CSNK1E-201ENST00000359867 DNAJC3Q13217 504 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms