RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ZNF280DQ6N043 979 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 CD300LGQ6UXG3 332 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 SCD5Q86SK9 330 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 DENND6AQ8IWF6 608 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 CNTD1Q8N815 330 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 RPRD1AQ96P16 312 aaPredicted RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 C20orf27Q9GZN8 174 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 SLC2A6Q9UGQ3 507 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 MTO1Q9Y2Z2 717 aaKnown RBP14.17□□□□□ -0.14
TRIM4-201ENST00000349062 PCDHB7Q9Y5E2 793 aa14.17□□□□□ -0.14
TRIM4-201ENST00000349062 SMAPO00193 183 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 F9P00740 461 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PTDSS1P48651 473 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 RAB27AP51159 221 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TAF10Q12962 218 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PRPSAP1Q14558 356 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PRKD1Q15139 912 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TAF12Q16514 161 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 DCLK2Q8N568 766 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 FTHL17Q9BXU8 183 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 MAN1C1Q9NR34 630 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PAPOLBQ9NRJ5 636 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 SMPD4Q9NXE4 827 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TMEM216Q9P0N5 145 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 SRRDQ9UH36 339 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PLLPQ9Y342 182 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TRIM17Q9Y577 477 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CEP290O15078 2479 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 A0A1W2PQ45 241 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 A0A1W2PQY0 241 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 NEMP1O14524 444 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TM9SF1O15321 606 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 ITM2AO43736 263 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 ALDOAP04075 364 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TPSB2P20231 275 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 MX2P20592 715 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CALB2P22676 271 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 STX3Q13277 289 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PDE1CQ14123 709 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TPSAB1Q15661 275 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 KIAA1841Q6NSI8 718 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 LRRC8BQ6P9F7 803 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PLD6Q8N2A8 252 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 MCUQ8NE86 351 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 LINC01599Q8WXQ3 324 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 DNAJC9Q8WXX5 260 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 EXT2Q93063 718 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 ALKBH8Q96BT7 664 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 RTP4Q96DX8 246 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CYP2S1Q96SQ9 504 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 DHRS4Q9BTZ2 278 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 RNPEPL1Q9HAU8 725 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CORO1CQ9ULV4 474 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 STARD13Q9Y3M8 1113 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 HACD1B0YJ81 288 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 J3KR12 359 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 HAUS5O94927 633 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 OAS1P00973 400 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 PGAM1P18669 254 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CCR10P46092 362 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 CNGA3Q16281 694 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 FAM219BQ5XKK7 198 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 ANO7Q6IWH7 933 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 TAS1R1Q7RTX1 841 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 C10orf107Q8IVU9 208 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 POU5F2Q8N7G0 328 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 OR6P1Q8NGX9 317 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 UCMAQ8WVF2 138 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 C10orf82Q8WW14 230 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 MCUR1Q96AQ8 359 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 DEFB118Q96PH6 123 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 DDX50Q9BQ39 737 aaKnown RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 EBF4Q9BQW3 602 aa14.16□□□□□ -0.14
TRIM4-201ENST00000349062 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
TRIM4-201ENST00000349062 SPATA31D3P0C874 917 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 GM2AP17900 193 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 NCF2P19878 526 aaPredicted RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 HOXC8P31273 242 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 TM4SF4P48230 202 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 PAPOLAP51003 745 aaKnown RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 ALFQ53S48 1182 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 CES4AQ5XG92 561 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 SPATA31D4Q6ZUB0 917 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 BHLHA9Q7RTU4 235 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 KCNMB4Q86W47 210 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 KLHDC9Q8NEP7 349 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 PDCD6IPQ8WUM4 868 aaKnown RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 NT5C3BQ969T7 300 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 ZNF512Q96ME7 567 aaPredicted RBP14.15□□□□□ -0.14
TRIM4-201ENST00000349062 NDNQ99608 321 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 OMDQ99983 421 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 GOLGA8QA0A0J9YX86 632 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 LOC100653049A0A140TA62 436 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 GOLGA8OA6NCC3 632 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 GOLGA8NF8WBI6 632 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 IRAK2O43187 625 aa14.15□□□□□ -0.14
TRIM4-201ENST00000349062 MAP3K13O43283 966 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms