RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZNF683Q8IZ20 524 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 FNIP1Q8TF40 1166 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 SNX19Q92543 992 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 ALG14Q96F25 216 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 EIF3CQ99613 913 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 MIR1-1HGQ9H1L0 117 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 PABPC3Q9H361 631 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 SMOC1Q9H4F8 434 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 MTG2Q9H4K7 406 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 DLL3Q9NYJ7 618 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 PILRBQ9UKJ0 227 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 SLC6A14Q9UN76 642 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 HS3ST2Q9Y278 367 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 OR51B4Q9Y5P0 310 aa16.16■□□□□ 0.18
TSPAN4-201ENST00000346501 METTL12A8MUP2 240 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 I6L893 689 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 SLC30A4O14863 429 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 ALOX15BO15296 676 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 CREB3O43889 395 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 PRPSAP2O60256 369 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 RNASEH2AO75792 299 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 LRIG2O94898 1065 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 SEMA4FO95754 770 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 GYPCP04921 128 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 SYPP08247 313 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 HTR7P34969 479 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 PSMD8P48556 350 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 ACAP1Q15027 740 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 DCAF12L1Q5VU92 463 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 E4F1Q66K89 784 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 SLC23A3Q6PIS1 610 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 STK40Q8N2I9 435 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 SH2D3CQ8N5H7 860 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 CCDC185Q8N715 623 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 PTPRN2Q92932 1015 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 ISCUQ9H1K1 167 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 MAGEH1Q9H213 219 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 TMEM9BQ9NQ34 198 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 DYRK4Q9NR20 520 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 TMEM248Q9NWD8 314 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 VPS51Q9UID3 782 aa16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 ATXN2Q99700 1313 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-201ENST00000346501 TMEM191CA6NGB0 347 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 MID1O15344 667 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 FGF10O15520 208 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 DAPK3O43293 454 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 ATMINO43313 823 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 GDF9O60383 454 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 RAMP2O60895 175 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 SERPINF2P08697 491 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 FOXK2Q01167 660 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 CCDC122Q5T0U0 273 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 STPG1Q5TH74 334 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 TCEAL6Q6IPX3 200 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 ALKBH5Q6P6C2 394 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 SLC41A1Q8IVJ1 513 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 HDDC3Q8N4P3 179 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 OR7D4Q8NG98 312 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 OR52K2Q8NGK3 314 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 TCEAL3Q969E4 200 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 ANP32EQ9BTT0 268 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 CD93Q9NPY3 652 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 DNAI1Q9UI46 699 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 FZD4Q9ULV1 537 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 FZD10Q9ULW2 581 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 NUP205Q92621 2012 aa16.14■□□□□ 0.17
TSPAN4-201ENST00000346501 A0A0D9SEW6 157 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 CXorf51AA0A1B0GTR3 108 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 A0A1B0GTW7 788 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 A0A1W2PP55 124 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 ZSCAN5CA6NGD5 496 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM47DPA6NHR8 397 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 MCF2LO15068 1137 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 SNAP91O60641 907 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 C7P10643 843 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 SRCP12931 536 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 GOT1P17174 413 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 ACSL1P33121 698 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 ZNF135P52742 658 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 TPI1P60174 286 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 IRX4P78413 519 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 POLD3Q15054 466 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 RAB6CQ53S08 254 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 ERMARDQ5T6L9 678 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 MANEALQ5VSG8 457 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 PEAR1Q5VY43 1037 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 HGSNATQ68CP4 663 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 Q6ZVU0 165 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 FRS2Q8WU20 508 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 FAM129BQ96TA1 746 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 TRIM5Q9C035 493 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 CEP44Q9C0F1 390 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 RAB6CQ9H0N0 254 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 DHX35Q9H5Z1 703 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 TMEM74BQ9NUR3 256 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 AP4E1Q9UPM8 1137 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 MYO15AQ9UKN7 3530 aa16.13■□□□□ 0.17
TSPAN4-201ENST00000346501 ZNF292O60281 2723 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms