RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 CXorf40AQ8TE69 158 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 CNDP1Q96KN2 507 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 TCF25Q9BQ70 676 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 CCDC3Q9BQI4 270 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 NTPCRQ9BSD7 190 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 THUMPD3Q9BV44 507 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ATP13A3Q9H7F0 1226 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 MORF4L1Q9UBU8 362 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 BLOC1S6Q9UL45 172 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 C16orf96A6NNT2 1141 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 BUD23O43709 281 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 SASH3O75995 380 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ADH1CP00326 375 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ILF2Q12905 390 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 CPNE1Q99829 537 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ACBD6Q9BR61 282 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ZNF670Q9BS34 389 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 BCAS3Q9H6U6 928 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 MDM4O15151 490 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 FGF19O95750 216 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ERBB2P04626 1255 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 SLC5A3P53794 718 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 EIF2B5Q13144 721 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ITGA9Q13797 1035 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 SLC25A52Q3SY17 297 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 CCDC153Q494R4 210 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 GDF6Q6KF10 455 aaPredicted RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 PAWRQ96IZ0 340 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 PANX3Q96QZ0 392 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 CPXM1Q96SM3 734 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ZNF556Q9HAH1 456 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ETNK2Q9NVF9 386 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 TDRKHQ9Y2W6 561 aaKnown RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 A0A096LPK6 155 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 E9PBE3 544 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 KLHL41O60662 606 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 PAGE1O75459 146 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 SERPINE1P05121 402 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ERVK-10P10266 1014 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 NFKB1P19838 968 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 CYP2A7P20853 494 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 PTPN3P26045 913 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 GALNTL6Q49A17 601 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 OXCT2Q9BYC2 517 aaPredicted RBP15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ELOVL6Q9H5J4 265 aa15.31■□□□□ 0.04
PCDHB13-201ENST00000341948 ADAMTS3O15072 1205 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 UBOX5O94941 541 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 MARCKSL1P49006 195 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 CDK16Q00536 496 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 ZNF792Q3KQV3 632 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 PSRC1Q6PGN9 363 aaPredicted RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 FAM9CQ8IZT9 166 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 CFAP52Q8N1V2 620 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 ATXN2LQ8WWM7 1075 aaKnown RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 CYGBQ8WWM9 190 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 JADE3Q92613 823 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 HES6Q96HZ4 224 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 WRAP73Q9P2S5 460 aaPredicted RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 NEDD8-MDP1E9PL57 170 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 LIASO43766 372 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 TBC1D4O60343 1298 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 NDUFS2O75306 463 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 MTA2O94776 668 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 CTSEP14091 401 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 TFE3P19532 575 aaPredicted RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 VHLP40337 213 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 PRELID2Q8N945 189 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 OR52K1Q8NGK4 314 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 SERAC1Q96JX3 654 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 TAGLN3Q9UI15 199 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 RAD54BQ9Y620 910 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 KCNA3P22001 575 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 MMP8P22894 467 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 FAAP100Q0VG06 881 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 CYLC2Q14093 348 aaPredicted RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 MARK2Q7KZI7 788 aaKnown RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 MCOLN3Q8TDD5 553 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 GABRQQ9UN88 632 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 ZNF510Q9Y2H8 683 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 V9GYQ6 96 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 TRIM13O60858 407 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 TNFRSF8P28908 595 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 PRKCQQ04759 706 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 NAB1Q13506 487 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 TP53BP2Q13625 1128 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 DMC1Q14565 340 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 POLNQ7Z5Q5 900 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 ECHDC2Q86YB7 292 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 NDRG1Q92597 394 aaKnown RBP15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 USP6NLQ92738 828 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 PHF21BQ96EK2 531 aa15.3■□□□□ 0.04
PCDHB13-201ENST00000341948 MED8Q96G25 268 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms