RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 FAM105AQ9NUU6 356 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 ZNF682O95780 498 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 CYP1A1P04798 512 aaPredicted RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 DARSP14868 501 aaKnown RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 TUFMP49411 452 aaKnown RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 IRX1P78414 480 aaPredicted RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 GBE1Q04446 702 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 BTG3Q14201 252 aaPredicted RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 SLC25A52Q3SY17 297 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 OR6Y1Q8NGX8 325 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 KCTD4Q8WVF5 259 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 M0R3G1 203 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 EDF1O60869 148 aaKnown RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 ATP5BP06576 529 aaKnown RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 RAP1GDS1P52306 607 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 MAXP61244 160 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 TOP6BLQ8N6T0 577 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 CATSPERZQ9NTU4 200 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 LZTS1Q9Y250 596 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 LRCH1Q9Y2L9 728 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 ENTPD5O75356 428 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 CLPTM1O96005 669 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 DHFR2Q86XF0 187 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 SPATA6LQ8N4H0 392 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 PCDH20Q8N6Y1 951 aaKnown RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 CPT1BQ92523 772 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 CSPG4P5Q96PW8 444 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 MRPL9Q9BYD2 267 aaKnown RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 MMADHCQ9H3L0 296 aaPredicted RBP19.63■□□□□ 0.73
CDK13-202ENST00000340829 PARVBQ9HBI1 364 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 MAN1C1Q9NR34 630 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 PACSIN3Q9UKS6 424 aa19.63■□□□□ 0.73
CDK13-202ENST00000340829 INPP4BO15327 924 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 HNRNPRO43390 633 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 ATP5C1P36542 298 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 CTBP1Q13363 440 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 CMC1Q7Z7K0 106 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 PTCH2Q9Y6C5 1203 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 GNG14A0A1W2PPG7 69 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 SYNCRIPO60506 623 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 LYPLA1O75608 230 aaPredicted RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 CCDC85BQ15834 202 aaPredicted RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 PFKFB4Q16877 469 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 EXOSC4Q9NPD3 245 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 SEMA4BQ9NPR2 832 aaPredicted RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 CNGB3Q9NQW8 809 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 SFMBT1Q9UHJ3 866 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 ADAM28Q9UKQ2 775 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 ZNF214Q9UL59 606 aaPredicted RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 PTGIRP43119 386 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 GRIA4P48058 902 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 BOP1Q14137 746 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 UBAP2LQ14157 1087 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 FNBP1LQ5T0N5 605 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 MFSD5Q6N075 450 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 PMF1Q6P1K2 205 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 SLC4A11Q8NBS3 891 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 OR56A4Q8NGH8 313 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 HIC2Q96JB3 615 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 DPY30Q9C005 99 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 ZMYM5Q9UJ78 669 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 PCDHGC3Q9UN70 934 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 RAD51BO15315 384 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 FAM155BO75949 473 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 LTA4HP09960 611 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 CLK1P49759 484 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 JAG1P78504 1218 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 XRCC4Q13426 336 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 SKIV2LQ15477 1246 aaKnown RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 PACS1Q6VY07 963 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 PLD5Q8N7P1 536 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 NKD2Q969F2 451 aaPredicted RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 TMEM79Q9BSE2 394 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 ACE2Q9BYF1 805 aaPredicted RBP19.62■□□□□ 0.73
CDK13-202ENST00000340829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.62■□□□□ 0.73
CDK13-202ENST00000340829 ZNF112Q9UJU3 913 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 EFR3BQ9Y2G0 817 aa19.62■□□□□ 0.73
CDK13-202ENST00000340829 CKBP12277 381 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 DDR2Q16832 855 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 DNAJC14Q6Y2X3 702 aaPredicted RBP19.61■□□□□ 0.73
CDK13-202ENST00000340829 LRRC8DQ7L1W4 858 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 ALYREFQ86V81 257 aaKnown RBP19.61■□□□□ 0.73
CDK13-202ENST00000340829 ACMSDQ8TDX5 336 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 FAM120BQ96EK7 910 aaKnown RBP19.61■□□□□ 0.73
CDK13-202ENST00000340829 SNX15Q9NRS6 342 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 SLC27A5Q9Y2P5 690 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 DERAQ9Y315 318 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 STAU1O95793 577 aaKnown RBP19.61■□□□□ 0.73
CDK13-202ENST00000340829 PIRTP0C851 137 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 PCNAP12004 261 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 CDC25CP30307 473 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 MBTD1Q05BQ5 628 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 MTA1Q13330 715 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 GPR141Q7Z602 305 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 ZNF398Q8TD17 642 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 CASP10Q92851 521 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 ZYG11BQ9C0D3 744 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 NMRK1Q9NWW6 199 aa19.61■□□□□ 0.73
CDK13-202ENST00000340829 COL1A2P08123 1366 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms