RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 NMUR2Q9GZQ4 415 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 GPBP1L1Q9HC44 474 aaPredicted RBP23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 CASS4Q9NQ75 786 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 PCDHB8Q9UN66 801 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 E9PAM4 449 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 C4orf50Q6ZRC1 276 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 SPATA6LQ8N4H0 392 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 SH3TC2Q8TF17 1288 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 SCLYQ96I15 445 aa23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 FAM193BQ96PV7 902 aaPredicted RBP23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 SEPT5Q99719 369 aaPredicted RBP23.57■■□□□ 1.36
CLPTM1-201ENST00000337392 HLA-DQB2P05538 268 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 BPGMP07738 259 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 MX2P20592 715 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 ERFP50548 548 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 ZBTB16Q05516 673 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 CTXN3Q4LDR2 81 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 C10orf107Q8IVU9 208 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 AGR3Q8TD06 166 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 PLCD4Q9BRC7 762 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 FTHL17Q9BXU8 183 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 SMOC2Q9H3U7 446 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 SNX15Q9NRS6 342 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 DCTN3O75935 186 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 GSTA2P09210 222 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 PAPOLAP51003 745 aaKnown RBP23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 TEDDM1Q5T9Z0 273 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 GIPC2Q8TF65 315 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 LRRC40Q9H9A6 602 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 CREBZFQ9NS37 354 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 SIRPGQ9P1W8 387 aa23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 CPSF2Q9P2I0 782 aaKnown RBP23.56■■□□□ 1.36
CLPTM1-201ENST00000337392 J3KR12 359 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 TMEM135Q86UB9 458 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 DENND6AQ8IWF6 608 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 FICDQ9BVA6 458 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 ZCWPW1Q9H0M4 648 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 MYLKQ15746 1914 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 HAPLN1P10915 354 aaPredicted RBP23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 RPL17P18621 184 aaKnown RBP23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 KCNMB4Q86W47 210 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 ZNF354CQ86Y25 554 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 FBXO27Q8NI29 283 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 AGAP11Q8TF27 550 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 MTBPQ96DY7 904 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 MIPEPQ99797 713 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 NOL6Q9H6R4 1146 aaKnown RBP23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 RRN3Q9NYV6 651 aa23.55■■□□□ 1.36
CLPTM1-201ENST00000337392 CCL22O00626 93 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 KIF3CO14782 793 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 AQP5P55064 265 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 OCRLQ01968 901 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 CTBP1Q13363 440 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 IHHQ14623 411 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 RTP2Q5QGT7 225 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 PPP1R14CQ8TAE6 165 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 TBC1D10AQ9BXI6 508 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 RBM22Q9NW64 420 aaKnown RBP eCLIP23.54■■□□□ 1.365e-6■■■□□ 15.9
CLPTM1-201ENST00000337392 FRMPD3Q5JV73 1810 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 CPB1P15086 417 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 TYMPP19971 482 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 SERPINB9P50453 376 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 CCDC15Q0P6D6 951 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 PCLAFQ15004 111 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 MAPRE1Q15691 268 aaKnown RBP23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 MGAT5BQ3V5L5 792 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 RASIP1Q5U651 963 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 PRSS55Q6UWB4 352 aaPredicted RBP23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 SLC25A41Q8N5S1 370 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 UROC1Q96N76 676 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 OSBPL2Q9H1P3 480 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 ACTL7AQ9Y615 435 aa23.54■■□□□ 1.36
CLPTM1-201ENST00000337392 NCAM2O15394 837 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 PHGDHO43175 533 aaKnown RBP23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 NOGQ13253 232 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 MANEALQ5VSG8 457 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 FAM219BQ5XKK7 198 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 SCAMP3O14828 347 aaKnown RBP23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 PLIN3O60664 434 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 ALDH1A1P00352 501 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 GP5P40197 560 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 CCR10P46092 362 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 ATN1P54259 1190 aaPredicted RBP23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 VWA5B1Q5TIE3 1220 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 ESRP1Q6NXG1 681 aaKnown RBP23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 RNF19BQ6ZMZ0 732 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 LRRC8DQ7L1W4 858 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 NUP93Q8N1F7 819 aa23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 BCL7CQ8WUZ0 217 aaPredicted RBP23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 PABPC5Q96DU9 382 aaKnown RBP23.53■■□□□ 1.36
CLPTM1-201ENST00000337392 ADAM12O43184 909 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 OAZ2O95190 189 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 VNN2O95498 520 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 FGF3P11487 239 aaPredicted RBP23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 GLRBP48167 497 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 MPP1Q00013 466 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 RAP1GAP2Q684P5 730 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 ZNF280DQ6N043 979 aa23.52■■□□□ 1.36
CLPTM1-201ENST00000337392 TMCO2Q7Z6W1 182 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms