RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KLHL23Q8NBE8 558 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SNRNP27Q8WVK2 155 aaKnown RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 WNT8BQ93098 351 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 PHF12Q96QT6 1004 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SLC39A3Q9BRY0 314 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SENP6Q9GZR1 1112 aaPredicted RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 LHX5Q9H2C1 402 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 MRPL46Q9H2W6 279 aaKnown RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 TRPC7Q9HCX4 862 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 EGFL7Q9UHF1 273 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 IPPQ9Y573 584 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 TEX264Q9Y6I9 313 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SAC3D1A6NKF1 404 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 VAV1P15498 845 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 PEX2P28328 305 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 CD52P31358 61 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ZNF235Q14590 738 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 MFSD10Q14728 455 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 GRM3Q14832 879 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 TARBP2Q15633 366 aaKnown RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 CLEC6AQ6EIG7 209 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ITPRIPL1Q6GPH6 555 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 KLC3Q6P597 504 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 PLEKHH3Q7Z736 793 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SH3TC2Q8TF17 1288 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 PCED1BQ96HM7 432 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SERPINI1Q99574 410 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ZNF184Q99676 751 aaPredicted RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 SYT17Q9BSW7 474 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ALG9Q9H6U8 611 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 POPDC2Q9HBU9 364 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 DCDC2Q9UHG0 476 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 HBS1LQ9Y450 684 aaKnown RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 C17orf102A2RUQ5 167 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 PFDN1O60925 122 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SIN3BO75182 1162 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 TADA2AO75478 443 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 LRIG2O94898 1065 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SERPINE1P05121 402 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ANPEPP15144 967 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 CES1P23141 567 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 MATKP42679 507 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 CHSY1Q86X52 802 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ATAD1Q8NBU5 361 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 NXNL1Q96CM4 212 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 TUBGCP3Q96CW5 907 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 MCRS1Q96EZ8 462 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 OR52B2Q96RD2 323 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 SEPHS2Q99611 448 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ACE2Q9BYF1 805 aaPredicted RBP8.38□□□□□ -1.07
HPS4-201ENST00000336873 ABHD16BQ9H3Z7 469 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 USP29Q9HBJ7 922 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 BPIFA1Q9NP55 256 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 GIMAP2Q9UG22 337 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 ST3GAL5Q9UNP4 418 aa8.38□□□□□ -1.07
HPS4-201ENST00000336873 NUP214P35658 2090 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 A0A0U1RQS6 177 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 KLHL33A6NCF5 533 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 F8W810 466 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 KATNA1O75449 491 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 KLHL2O95198 593 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ALADP13716 330 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 SLC26A2P50443 739 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ABCE1P61221 599 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 MRPS5P82675 430 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 PLOD1Q02809 727 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 MOGSQ13724 837 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 SLC9B1Q4ZJI4 515 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 SLC39A12Q504Y0 691 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ARL13AQ5H913 290 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 UTS2BQ765I0 119 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 AFAP1L2Q8N4X5 818 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 SLCO2A1Q92959 643 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ZNF512Q96ME7 567 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 ADAM2Q99965 735 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CDYLQ9Y232 598 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 BTRCQ9Y297 605 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 DTNAQ9Y4J8 743 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CDY2AQ9Y6F7 541 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CDY1Q9Y6F8 540 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 TTC3P53804 2025 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 FAM149AA5PLN7 773 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 AXIN1O15169 862 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CCDC166P0CW27 439 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CHRM3P20309 590 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 DNAJB2P25686 324 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 GRK4P32298 578 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ADRA1BP35368 520 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ACADSBP45954 432 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ATN1P54259 1190 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 MRPS35P82673 323 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 ARHGAP1Q07960 439 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 SNX17Q15036 470 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 DCAF4L1Q3SXM0 396 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 OTUD3Q5T2D3 398 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 OLFML1Q6UWY5 402 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms