RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PDCD2LQ9BRP1 358 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 MTA2O94776 668 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 LBPP18428 481 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 TNFRSF8P28908 595 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 LRPAP1P30533 357 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 ESRP1Q6NXG1 681 aaKnown RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 LINC00116Q8NCU8 138 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 TEKT5Q96M29 485 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 ZNF184Q99676 751 aaPredicted RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 CIPCQ9C0C6 399 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 IL22Q9GZX6 179 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 SAE1Q9UBE0 346 aaPredicted RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 ITGA2P17301 1181 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 TUBP50607 506 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 TCEA2Q15560 299 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 LRRC38Q5VT99 294 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 GLT6D1Q7Z4J2 308 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 GGA2Q9UJY4 613 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 DNPEPQ9ULA0 475 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 DUSP10Q9Y6W6 482 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 CATP04040 527 aaKnown RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 OR1E1P30953 314 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 RAP1GAPP47736 663 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 FGD3Q5JSP0 725 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 BHLHB9Q6PI77 547 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 C18orf25Q96B23 403 aaPredicted RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 MED8Q96G25 268 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
HLCS-201ENST00000336648 RIBC2Q9H4K1 309 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 EVA1BQ9NVM1 165 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 STOML2Q9UJZ1 356 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 CDH9Q9ULB4 789 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 CNTNAP2Q9UHC6 1331 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
HLCS-201ENST00000336648 MGRN1O60291 552 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 OR6A2O95222 327 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 MGAT1P26572 445 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 RCVRNP35243 200 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 RHAGQ02094 409 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 SEZ6Q53EL9 994 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 TMC7Q7Z402 723 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 CLYBLQ8N0X4 340 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 EMC1Q8N766 993 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 ZNF671Q8TAW3 534 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 VMP1Q96GC9 406 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 YME1L1Q96TA2 773 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 ANKZF1Q9H8Y5 726 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 PHF11Q9UIL8 331 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.28
HLCS-201ENST00000336648 PECAM1P16284 738 aaPredicted RBP13.27□□□□□ -0.28
HLCS-201ENST00000336648 BCL2L1Q07817 233 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 OTUD3Q5T2D3 398 aaPredicted RBP13.27□□□□□ -0.28
HLCS-201ENST00000336648 NT5DC1Q5TFE4 455 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 LYPLAL1Q5VWZ2 237 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 MFSD7Q6UXD7 560 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 SYT12Q8IV01 421 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 DEPDC4Q8N2C3 294 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 EEF1AKMT1Q8WVE0 214 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 POLR1EQ9GZS1 481 aaKnown RBP13.27□□□□□ -0.28
HLCS-201ENST00000336648 INVSQ9Y283 1065 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 NCKAP1Q9Y2A7 1128 aa13.27□□□□□ -0.28
HLCS-201ENST00000336648 ACKR2O00590 384 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 LSM1O15116 133 aaKnown RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 TYMPP19971 482 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 NDST1P52848 882 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 EN1Q05925 392 aaPredicted RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 SQLEQ14534 574 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 ARMC12Q5T9G4 340 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 NET1Q7Z628 596 aaPredicted RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 SNX32Q86XE0 403 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 GPSM1Q86YR5 675 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 STAG3L4Q8TBR4 150 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 NUAK2Q9H093 628 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 SNX6Q9UNH7 406 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 ZNF232Q9UNY5 417 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 PCDH8O95206 1070 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 NPR3P17342 541 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 FGFR2P21802 821 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 GPR1P46091 355 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 GSTM5P46439 218 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 IL2P60568 153 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 TNK2Q07912 1038 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 ZNF844Q08AG5 666 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 ORC1Q13415 861 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 CYP20A1Q6UW02 462 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 COMMD2Q86X83 199 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
HLCS-201ENST00000336648 ACMSDQ8TDX5 336 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 FRMPD4Q14CM0 1322 aa13.27□□□□□ -0.29
HLCS-201ENST00000336648 RPL21P46778 160 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms