RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 MPOP05164 745 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 ASGR1P07306 291 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 RALBP11234 206 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 CPA3P15088 417 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 CCNCP24863 283 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 YY1P25490 414 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 ABCE1P61221 599 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 ARHGAP8P85298 464 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 RCN2Q14257 317 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 KPNB1Q14974 876 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 ACSBG2Q5FVE4 666 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 ARTNQ5T4W7 220 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 MAVSQ7Z434 540 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 TMPRSS6Q8IU80 811 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 RBM15BQ8NDT2 890 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 FBXO27Q8NI29 283 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 HAPLN3Q96S86 360 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 ARHGAP39Q9C0H5 1083 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 CAB39LQ9H9S4 337 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 IARS2Q9NSE4 1012 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 MYLKQ15746 1914 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 NYNRINQ9P2P1 1898 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 A0A096LPK6 155 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 SEPT4O43236 478 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 PSMD3O43242 534 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 HOXC13P31276 330 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 PGM1P36871 562 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 HARS2P49590 506 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 PGFP49763 221 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 CDK7P50613 346 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 SLC5A3P53794 718 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 IRF9Q00978 393 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 TRIM32Q13049 653 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 ITGA9Q13797 1035 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 UBAP2LQ14157 1087 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 MAPRE1Q15691 268 aaKnown RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 DLG2Q15700 870 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 BRMS1LQ5PSV4 323 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 RABGAP1LQ5R372 815 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 MANEALQ5VSG8 457 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 THEM5Q8N1Q8 247 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 URGCPQ8TCY9 931 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 PPP4R1Q8TF05 950 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 ZNF419Q96HQ0 510 aaPredicted RBP14.84□□□□□ -0.03
TPM3-206ENST00000330188 SUSD3Q96L08 255 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 UROC1Q96N76 676 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 KIFC1Q9BW19 673 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 PNPOQ9NVS9 261 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 PLA2G4CQ9UP65 541 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 SORCS3Q9UPU3 1222 aa14.84□□□□□ -0.03
TPM3-206ENST00000330188 SPECC1L-ADORA2AF8WAN1 911 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 AP3B1O00203 1094 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 TNFRSF10BO14763 440 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 TIMM44O43615 452 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 MAGEC1O60732 1142 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 SLC10A3P09131 477 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ALOX15P16050 662 aaPredicted RBP14.83□□□□□ -0.04
TPM3-206ENST00000330188 AOC1P19801 751 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 RAP1GDS1P52306 607 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 INHBEP58166 350 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 TSPY1Q01534 308 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 KDSRQ06136 332 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 LINC00523Q86TU6 105 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 TNS4Q8IZW8 715 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ARHGAP24Q8N264 748 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ATPAF2Q8N5M1 289 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ACVR1CQ8NER5 493 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 SPATA22Q8NHS9 363 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 WDR60Q8WVS4 1066 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ANKRD27Q96NW4 1050 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ABCC13Q9NSE7 274 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 DNAJC28Q9NX36 388 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 SFMBT1Q9UHJ3 866 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 G3V2L1 256 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 ZNF195O14628 629 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 MSI1O43347 362 aaKnown RBP14.83□□□□□ -0.04
TPM3-206ENST00000330188 PAGE1O75459 146 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 C2P06681 752 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 PAX3P23760 479 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 DNAJB2P25686 324 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 CSRP3P50461 194 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 KCNA10Q16322 511 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 SAPCD2Q86UD0 394 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.83□□□□□ -0.04
TPM3-206ENST00000330188 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.83□□□□□ -0.04
TPM3-206ENST00000330188 CFAP61Q8NHU2 1237 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 CASP10Q92851 521 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 VPS39Q96JC1 886 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 FCRL5Q96RD9 977 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 IL12RB2Q99665 862 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 SMOC2Q9H3U7 446 aa14.83□□□□□ -0.04
TPM3-206ENST00000330188 AAR2Q9Y312 384 aaKnown RBP14.83□□□□□ -0.04
TPM3-206ENST00000330188 GOLGA8TH3BQL2 631 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 MAFKO60675 156 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 MT-CYBP00156 380 aaPredicted RBP14.82□□□□□ -0.04
TPM3-206ENST00000330188 TYMPP19971 482 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 CCR1P32246 355 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 HTR7P34969 479 aa14.82□□□□□ -0.04
TPM3-206ENST00000330188 PTDSS1P48651 473 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms