RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 CIPCQ9C0C6 399 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 PPCSQ9HAB8 311 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 LAMB2P55268 1798 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 NVLO15381 856 aaKnown RBP16.32■□□□□ 0.2
SYNM-201ENST00000328642 ENTPD5O75356 428 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 LRG1P02750 347 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 INHAP05111 366 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 CYP2C18P33260 490 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 GCKP35557 465 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 ZNF132P52740 706 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 RHOAP61586 193 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 GRIK3Q13003 919 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 TMEM259Q4ZIN3 620 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 MARCH8Q5T0T0 291 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 SCIMPQ6UWF3 145 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 SAPCD2Q86UD0 394 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 RASAL3Q86YV0 1011 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 OR52K2Q8NGK3 314 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 FGD4Q96M96 766 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 TBL1YQ9BQ87 522 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
SYNM-201ENST00000328642 DNAJB4Q9UDY4 337 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 LSM7Q9UK45 103 aaKnown RBP16.32■□□□□ 0.2
SYNM-201ENST00000328642 AURKCQ9UQB9 309 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 F5P12259 2224 aa16.32■□□□□ 0.2
SYNM-201ENST00000328642 POLR2AP24928 1970 aaKnown RBP16.32■□□□□ 0.2
SYNM-201ENST00000328642 COL2A1P02458 1487 aaPredicted RBP16.31■□□□□ 0.2
SYNM-201ENST00000328642 TM9SF1O15321 606 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 TIMM44O43615 452 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 GUCA1CO95843 209 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 ITGB1P05556 798 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 HNRNPLP14866 589 aaKnown RBP eCLIP16.31■□□□□ 0.2
SYNM-201ENST00000328642 CDH13P55290 713 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 KLF1Q13351 362 aaPredicted RBP16.31■□□□□ 0.2
SYNM-201ENST00000328642 INTS6LQ5JSJ4 861 aaKnown RBP16.31■□□□□ 0.2
SYNM-201ENST00000328642 LRRC8EQ6NSJ5 796 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 C4orf22Q6V702 233 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 GALNT4Q8N4A0 578 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 PNPOQ9NVS9 261 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 STOML1Q9UBI4 398 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 DCDC2Q9UHG0 476 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 CHEK2O96017 543 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 SERPINF2P08697 491 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 UBAP2LQ14157 1087 aaKnown RBP16.31■□□□□ 0.2
SYNM-201ENST00000328642 PDK4Q16654 411 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 SPDYAQ5MJ70 313 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 TTC7BQ86TV6 843 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 ECHDC2Q86YB7 292 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 ARFGAP1Q8N6T3 406 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 TEX9Q8N6V9 391 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 DCBLD1Q8N8Z6 715 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 GBP5Q96PP8 586 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 ADAMTS10Q9H324 1103 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 PLA2G4CQ9UP65 541 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 WNT3AP56704 352 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
SYNM-201ENST00000328642 CST9Q5W186 159 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 AGMOQ6ZNB7 445 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 C10orf107Q8IVU9 208 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 ICA1LQ8NDH6 482 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 NMRAL1Q9HBL8 299 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 GKN1Q9NS71 199 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
SYNM-201ENST00000328642 PIGNO95427 931 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 ANP32DO95626 131 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 KRT16P08779 473 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 RPL9P32969 192 aaKnown RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 ABL2P42684 1182 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 PACS1Q6VY07 963 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 DENND6AQ8IWF6 608 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 AGGF1Q8N302 714 aaeCLIP16.3■□□□□ 0.2
SYNM-201ENST00000328642 NAT8LQ8N9F0 302 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 SMG8Q8ND04 991 aaKnown RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 HDAC10Q969S8 669 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 FAM96AQ9H5X1 160 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 CHKBQ9Y259 395 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 NCAM2O15394 837 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 GPR32O75388 356 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 FMO4P31512 558 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 CD151P48509 253 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 PEX6Q13608 980 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 DDX39BQ13838 428 aaKnown RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 TCEA2Q15560 299 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 SNX31Q8N9S9 440 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 TDRD5Q8NAT2 981 aaKnown RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 NAT14Q8WUY8 206 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 HIPK3Q9H422 1215 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 CTPS1P17812 591 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 ATP5C1P36542 298 aaKnown RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 SLC25A3Q00325 362 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 TEX44Q53QW1 395 aa16.3■□□□□ 0.2
SYNM-201ENST00000328642 ESRP1Q6NXG1 681 aaKnown RBP16.3■□□□□ 0.2
SYNM-201ENST00000328642 LRRC43Q8N309 656 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms