RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DENND4CQ5VZ89 1909 aa5.13□□□□□ -1.59
CKS1B-201ENST00000308987 ANKRD11Q6UB99 2663 aaPredicted RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ESYT3A0FGR9 886 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ANKRD62A6NC57 917 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ZSCAN5CA6NGD5 496 aaPredicted RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC169A6NNP5 214 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 DDX3XO00571 662 aaKnown RBP eCLIP5.12□□□□□ -1.595e-15■■■□□ 17.2
CKS1B-201ENST00000308987 NRP1O14786 923 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MAPK13O15264 365 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ASAP2O43150 1006 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CHMP2AO43633 222 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 TBCAO75347 108 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 DNAJC8O75937 253 aaPredicted RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 AKAP3O75969 853 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 KRT37O76014 449 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MTA2O94776 668 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 AGTP01019 485 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 DCNP07585 359 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SPATA31D3P0C874 917 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CD247P20963 164 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CHRNA3P32297 505 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SLC8A1P32418 973 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CA8P35219 290 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 HOXD13P35453 343 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SOX5P35711 763 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MMP13P45452 471 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SEPHS1P49903 392 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MNAT1P51948 309 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF131P52739 623 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 GALCP54803 685 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SNRPFP62306 86 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ADCY2Q08462 1091 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 XRCC4Q13426 336 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ALCAMQ13740 583 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ITIH4Q14624 930 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SLMAPQ14BN4 828 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MTERF2Q49AM1 385 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ERMARDQ5T6L9 678 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 GKAP1Q5VSY0 366 aaPredicted RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 PLA2G4FQ68DD2 849 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 KCTD16Q68DU8 428 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 TWF2Q6IBS0 349 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SPATA31D4Q6ZUB0 917 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC149Q6ZUS6 474 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ANO5Q75V66 913 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MRPL10Q7Z7H8 261 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 DAAM2Q86T65 1068 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SFR1Q86XK3 245 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CATSPER3Q86XQ3 398 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 KLHL7Q8IXQ5 586 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC13Q8IYE1 715 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 KIAA2013Q8IYS2 634 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CACNA2D3Q8IZS8 1091 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SLC44A3Q8N4M1 653 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SUMF1Q8NBK3 374 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 OLIG1Q8TAK6 271 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CTNNBL1Q8WYA6 563 aaPredicted RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CHMP6Q96FZ7 201 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 PEX11GQ96HA9 241 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 FAM167AQ96KS9 214 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 B3GALT6Q96L58 329 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 FMO2Q99518 471 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 REEP2Q9BRK0 252 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MRPL9Q9BYD2 267 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 PABPC3Q9H361 631 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MFSD1Q9H3U5 465 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 PLEKHA4Q9H4M7 779 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 SFXN1Q9H9B4 322 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 WDR6Q9NNW5 1121 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MAN1C1Q9NR34 630 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 KLC4Q9NSK0 619 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ZDHHC18Q9NUE0 388 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 PCYOX1Q9UHG3 505 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ODF2LQ9ULJ1 636 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 CA14Q9ULX7 337 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 PIN4Q9Y237 131 aaKnown RBP5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF451Q9Y4E5 1061 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 GREB1Q4ZG55 1949 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 MYH11P35749 1972 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 GON4LQ3T8J9 2241 aa5.12□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF638Q14966 1978 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC195A0A1B0GUA6 201 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 CFAP73A6NFT4 308 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 SHISA7A6NL88 538 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 ANKRD65E5RJM6 399 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 ANHXE9PGG2 379 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 KIAA0391O15091 583 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 TEX28O15482 410 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 DAPK3O43293 454 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 PHF2O75151 1096 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 MAFO75444 373 aaPredicted RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 LMNAP02545 664 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 SP9P0CG40 484 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 GZMAP12544 262 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 DRD4P21917 467 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 KLRC2P26717 231 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 TMOD1P28289 359 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 RDXP35241 583 aaKnown RBP5.11□□□□□ -1.59
CKS1B-201ENST00000308987 FMO5P49326 533 aa5.11□□□□□ -1.59
CKS1B-201ENST00000308987 MRPS25P82663 173 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms