RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MYO6Q9UM54 1294 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 CACNA1BQ00975 2339 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 SIGLEC16A6NMB1 481 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 K7ERQ8 282 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 SMAD6O43541 496 aaKnown RBP20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 ZNF821O75541 412 aaPredicted RBP20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 SYPP08247 313 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 C5AR1P21730 350 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 GLDCP23378 1020 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 SDC4P31431 198 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 NSFP46459 744 aaKnown RBP20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 PSMD8P48556 350 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 C1QBPQ07021 282 aaKnown RBP20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 CDO1Q16878 200 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 KLHL40Q2TBA0 621 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 Q6ZVU0 165 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 NLRP14Q86W24 1093 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 CCDC185Q8N715 623 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 DCAF4L2Q8NA75 395 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 OR7D4Q8NG98 312 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 VOPP1Q96AW1 172 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 IL21RQ9HBE5 538 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 TM9SF3Q9HD45 589 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 PPARGC1AQ9UBK2 798 aaKnown RBP20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 PPM1HQ9ULR3 514 aa20.33■□□□□ 0.85
PDZRN3-202ENST00000308537 IGF2RP11717 2491 aa20.33■□□□□ 0.84
PDZRN3-202ENST00000308537 AKAP13Q12802 2813 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 A0A1W2PQC6 194 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 MCF2LO15068 1137 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 OPHN1O60890 802 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 CD160O95971 181 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 ADH1BP00325 375 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 CTSLP07711 333 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 RHOCP08134 193 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 KRT3P12035 628 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 FERP16591 822 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 KCNA4P22459 653 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 CD27P26842 260 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 ADPRHP54922 357 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 RPL7AP62424 266 aaKnown RBP20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 FAM193AP78312 1265 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 SHC2P98077 582 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 KCNT1Q5JUK3 1230 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 KIAA0895LQ68EN5 471 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 NCEH1Q6PIU2 408 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 NTAN1Q96AB6 310 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 CNTNAP3BQ96NU0 1288 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 PPP1R9BQ96SB3 815 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 CNTNAP3Q9BZ76 1288 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 ZDHHC5Q9C0B5 715 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 ZYG11BQ9C0D3 744 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 MUC3BQ9H195 1237 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 OSBPL2Q9H1P3 480 aa20.32■□□□□ 0.84
PDZRN3-202ENST00000308537 WDFY3Q8IZQ1 3526 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 ILVBLA1L0T0 632 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 LRRC53A6NM62 1247 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 SMTNL1A8MU46 457 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 PLK4O00444 970 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 RNASEH1O60930 286 aaKnown RBP20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 SRGAP2O75044 1071 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 RNASEH2AO75792 299 aaKnown RBP20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 CALB1P05937 261 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 GOT1P17174 413 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 CSNK1EP49674 416 aaKnown RBP20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 ATXN3P54252 364 aaPredicted RBP20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 ARF5P84085 180 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 OGDHQ02218 1023 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 ZNF252P-AS1Q0IIN9 211 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 NR1I3Q14994 352 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 LAYNQ6UX15 382 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 LRRC31Q6UY01 552 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 MCOLN2Q8IZK6 566 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 HDDC3Q8N4P3 179 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 OR2A12Q8NGT7 310 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 FAM172AQ8WUF8 416 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 SLC25A13Q9UJS0 675 aa20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 FNDC3AQ9Y2H6 1198 aaKnown RBP20.31■□□□□ 0.84
PDZRN3-202ENST00000308537 A0A1B0GVT2 93 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 A0A1W2PPC4 97 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 SYCE3A1L190 88 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 WNT9AO14904 365 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 ALOX15BO15296 676 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 CCP110O43303 1012 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 LRIG2O94898 1065 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 FSBPO95073 299 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 IL1BP01584 269 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 GPD1P21695 349 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 RRM1P23921 792 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 OR1E1P30953 314 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 NNMTP40261 264 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 PBX1P40424 430 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 GRIA4P48058 902 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 SCAPQ12770 1279 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 SLC14A1Q13336 389 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 KIF19Q2TAC6 998 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 C6orf118Q5T5N4 469 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 AGBL4Q5VU57 503 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 ACAD10Q6JQN1 1059 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 LINGO4Q6UY18 593 aa20.3■□□□□ 0.84
PDZRN3-202ENST00000308537 ZNF783Q6ZMS7 281 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms