RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SMG9Q9H0W8 520 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CDC42EP4Q9H3Q1 356 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 OGFRQ9NZT2 677 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 MSRAQ9UJ68 235 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 STOML2Q9UJZ1 356 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PLAAQ9Y263 795 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 NFS1Q9Y697 457 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ZFP37Q9Y6Q3 630 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 LAMA3Q16787 3333 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 RASA4BC9J798 803 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 GFRA2O00451 464 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 STK25O00506 426 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 RASA4O43374 803 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 TSPAN3O60637 253 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 OPHN1O60890 802 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ABCB7O75027 752 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CKMP06732 381 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 HNRNPA1P09651 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PTPN2P17706 415 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CCNCP24863 283 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PSMB4P28070 264 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 NRIP1P48552 1158 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 NDST2P52849 883 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 FAM193AP78312 1265 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 TCF15Q12870 199 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 MTM1Q13496 603 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SEMA5AQ13591 1074 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 KCNC3Q14003 757 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SLMAPQ14BN4 828 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 TEAD2Q15562 447 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 DUSP6Q16828 381 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 MSS51Q4VC12 460 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PRSS36Q5K4E3 855 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ADGRF1Q5T601 910 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ARHGEF18Q6ZSZ5 1173 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF534Q76KX8 674 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 OR52K2Q8NGK3 314 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 OR2W6PQ8NHA6 318 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 HMCESQ96FZ2 354 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 GCNAQ96QF7 691 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 RBM15Q96T37 977 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PRKD2Q9BZL6 878 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 FOXP3Q9BZS1 431 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PABPC3Q9H361 631 aaKnown RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 TRAV19A0A0A6YYK7 116 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CCDC195A0A1B0GUA6 201 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 GOLGA6BA6NDN3 693 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 NDC80O14777 642 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 RIPK2O43353 540 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 LATS1O95835 1130 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SYF2O95926 243 aaKnown RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PEX11BO96011 259 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SHBGP04278 402 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ACVRL1P37023 503 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 MAPKAPK2P49137 400 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 NUMBP49757 651 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF33AQ06730 810 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 TEX44Q53QW1 395 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SPDYCQ5MJ68 293 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 HP1BP3Q5SSJ5 553 aaPredicted RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CFAP58Q5T655 872 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 GPR158Q5T848 1215 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ALS2CLQ60I27 953 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 C4orf22Q6V702 233 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 PID1Q7Z2X4 250 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 GRASPQ7Z6J2 395 aaPredicted RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 RELL1Q8IUW5 271 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 FAM217AQ8IXS0 508 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 AGGF1Q8N302 714 aaeCLIP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 C12orf76Q8N812 135 aaPredicted RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CNTD1Q8N815 330 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 USP33Q8TEY7 942 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 LMAN2LQ9H0V9 348 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 TLE6Q9H808 572 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SLC28A3Q9HAS3 691 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 SAYSD1Q9NPB0 183 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 ZDHHC7Q9NXF8 308 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 NINJ2Q9NZG7 142 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CFAP97Q9P2B7 532 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 KLHL8Q9P2G9 620 aaPredicted RBP7.12□□□□□ -1.27
PTCD2-201ENST00000308077 IGSF9Q9P2J2 1179 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 CCL26Q9Y258 94 aa7.12□□□□□ -1.27
PTCD2-201ENST00000308077 NUP210Q8TEM1 1887 aaPredicted RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 E7ESA3 106 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 J3KR12 359 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 SMAPO00193 183 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 LEFTY2O00292 366 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 MATN3O15232 486 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 MTSS1O43312 755 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 RAMP2O60895 175 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 XYLBO75191 536 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 AVILO75366 819 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 STK10O94804 968 aaKnown RBP7.11□□□□□ -1.27
PTCD2-201ENST00000308077 JCHAINP01591 159 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 APRTP07741 180 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 POU2F2P09086 479 aa7.11□□□□□ -1.27
PTCD2-201ENST00000308077 CCNB1P14635 433 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms