RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CXXC1Q9P0U4 656 aaPredicted RBP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 INSL5Q9Y5Q6 135 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 FAM47DPA6NHR8 397 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 PRPF4O43172 522 aaKnown RBP eCLIP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 PSMD3O43242 534 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 HLA-DQB2P05538 268 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 EN2P19622 333 aaPredicted RBP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 PPIGQ13427 754 aaKnown RBP eCLIP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 C5orf22Q49AR2 442 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 FAM133BQ5BKY9 247 aaKnown RBP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 ZNF473Q8WTR7 871 aaKnown RBP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 NKIRAS1Q9NYS0 192 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 MAFFQ9ULX9 164 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 IQANK1A0A1B0GTG1 560 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 C2orf78A6NCI8 922 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 J3KR12 359 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 KLKB1P03952 638 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 KRT4P19013 534 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 EPHB3P54753 998 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 HNRNPH2P55795 449 aaKnown RBP22.73■■□□□ 1.23
SMAD1-201ENST00000302085 RFWD3Q6PCD5 774 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 CHMP6Q96FZ7 201 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 NAT9Q9BTE0 207 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 FAM107BQ9H098 131 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 BFARQ9NZS9 450 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 ZNF180Q9UJW8 692 aa22.73■■□□□ 1.23
SMAD1-201ENST00000302085 TYROBPO43914 113 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 STC2O76061 302 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 OAS1P00973 400 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CNPP09543 421 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CTSAP10619 480 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CCT5P48643 541 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 HARS2P49590 506 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 SLC18A1P54219 525 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CFAP52Q8N1V2 620 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 DNAAF3Q8N9W5 541 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 FATE1Q969F0 183 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 KLF16Q9BXK1 252 aaPredicted RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 SSU72Q9NP77 194 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 SMG5Q9UPR3 1016 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 AAR2Q9Y312 384 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 F5H5T6 163 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 MT-CYBP00156 380 aaPredicted RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 DRD4P21917 467 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 PPP3CCP48454 512 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 NPY2RP49146 381 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 WDR4P57081 412 aaKnown RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CRYMQ14894 314 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 ANO4Q32M45 955 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CERCAMQ5T4B2 595 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 CES3Q6UWW8 571 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 DENND1CQ8IV53 801 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 KLHL23Q8NBE8 558 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 GDAP1Q8TB36 358 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 WBP2Q969T9 261 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 PSMG2Q969U7 264 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 TTC17Q96AE7 1141 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 PLD4Q96BZ4 506 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 SERAC1Q96JX3 654 aa22.72■■□□□ 1.23
SMAD1-201ENST00000302085 FCRL3Q96P31 734 aaPredicted RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 KLF6Q99612 283 aaPredicted RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 ZNF334Q9HCZ1 680 aaPredicted RBP22.72■■□□□ 1.23
SMAD1-201ENST00000302085 MT-ND3P03897 115 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 F11P03951 625 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 TPH1P17752 444 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 OR1E1P30953 314 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 RPA3P35244 121 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-201ENST00000302085 SLC11A2P49281 568 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 FPGSQ05932 587 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 HNRNPDQ14103 355 aaKnown RBP22.71■■□□□ 1.23
SMAD1-201ENST00000302085 POLD3Q15054 466 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-201ENST00000302085 QPCTQ16769 361 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 TTC39BQ5VTQ0 682 aaPredicted RBP22.71■■□□□ 1.23
SMAD1-201ENST00000302085 NAPEPLDQ6IQ20 393 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 CKAP2Q8WWK9 683 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 CLP1Q92989 425 aaKnown RBP22.71■■□□□ 1.23
SMAD1-201ENST00000302085 ZBED2Q9BTP6 218 aa22.71■■□□□ 1.23
SMAD1-201ENST00000302085 RAMP2O60895 175 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 ANXA9O76027 345 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 MAPKAPK2P49137 400 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 CREMQ03060 361 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 TMEM240Q5SV17 173 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 SH2D5Q6ZV89 423 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 DYDC1Q8WWB3 177 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 AZIN2Q96A70 460 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 KLHL5Q96PQ7 755 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 SAMD15Q9P1V8 674 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 STK39Q9UEW8 545 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 INSL6Q9Y581 213 aa22.7■■□□□ 1.23
SMAD1-201ENST00000302085 GOLGA8RI6L899 631 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 TGM5O43548 720 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 POLBP06746 335 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 HSPA1AP0DMV8 641 aaKnown RBP22.7■■□□□ 1.22
SMAD1-201ENST00000302085 HSPA1BP0DMV9 641 aaKnown RBP22.7■■□□□ 1.22
SMAD1-201ENST00000302085 CORO1AP31146 461 aaKnown RBP22.7■■□□□ 1.22
SMAD1-201ENST00000302085 CA8P35219 290 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 RENBPP51606 427 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 SERINC3Q13530 473 aa22.7■■□□□ 1.22
SMAD1-201ENST00000302085 PARP15Q460N3 678 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms