RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TTC34A8MYJ7 566 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 SASH3O75995 380 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 LRIG2O94898 1065 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 CYP1A2P05177 515 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 RHOQP17081 205 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 L1CAMP32004 1257 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 STK19P49842 368 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-201ENST00000296503 SCAPQ12770 1279 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 CAMK2GQ13555 558 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-201ENST00000296503 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 PLK5Q496M5 336 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 ERMARDQ5T6L9 678 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 KDM1BQ8NB78 822 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 LRRN4CLQ8ND94 238 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 OR2T3Q8NH03 318 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 MYO19Q96H55 970 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 ZC3H10Q96K80 434 aaKnown RBP12.39□□□□□ -0.43
HMGB2-201ENST00000296503 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 DUSP15Q9H1R2 295 aaPredicted RBP12.39□□□□□ -0.43
HMGB2-201ENST00000296503 PIEZO1Q92508 2521 aa12.39□□□□□ -0.43
HMGB2-201ENST00000296503 EML5Q05BV3 1969 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 A0A0D9SEW6 157 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ILVBLA1L0T0 632 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 RETP07949 1114 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 BCKDHBP21953 392 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 EPHB2P29323 1055 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 MIPP30301 263 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 COPAP53621 1224 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 PIGHQ14442 188 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ACAP1Q15027 740 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ASTE1Q2TB18 679 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 HNRNPA1L2Q32P51 320 aaKnown RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ABCA7Q8IZY2 2146 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ARFGAP1Q8N6T3 406 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 CTNNBL1Q8WYA6 563 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 EPAS1Q99814 870 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 C2orf49Q9BVC5 232 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 CARD6Q9BX69 1037 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 DHX35Q9H5Z1 703 aaKnown RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 RETREG1Q9H6L5 497 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 GPATCH2LQ9NWQ4 482 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 CTTNBP2NLQ9P2B4 639 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 IP6K2Q9UHH9 426 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ANAPC7Q9UJX3 599 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 OR51B4Q9Y5P0 310 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 EDDM13A0A1B0GTR0 161 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 TARSL2A2RTX5 802 aaKnown RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 MYO1FO00160 1098 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 RNASEH1O60930 286 aaKnown RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 SIN3BO75182 1162 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 DHPSP49366 369 aaPredicted RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ARTNQ5T4W7 220 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 MANEALQ5VSG8 457 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
HMGB2-201ENST00000296503 TMEM139Q8IV31 216 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 BTBD6Q96KE9 485 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 PACSIN1Q9BY11 444 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ARRDC1-AS1Q9H2J1 176 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 ITM2CQ9NQX7 267 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 TMEM248Q9NWD8 314 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 AP4E1Q9UPM8 1137 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 VPS13AQ96RL7 3174 aa12.38□□□□□ -0.43
HMGB2-201ENST00000296503 EP300Q09472 2414 aaPredicted RBP12.37□□□□□ -0.43
HMGB2-201ENST00000296503 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 CBX4O00257 560 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 DAPK3O43293 454 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 SNAP91O60641 907 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 NDUFS2O75306 463 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 LRCH4O75427 683 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 DNTTP04053 509 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 SSR1P43307 286 aaKnown RBP12.37□□□□□ -0.43
HMGB2-201ENST00000296503 MAPKAPK2P49137 400 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 RPL6Q02878 288 aaKnown RBP12.37□□□□□ -0.43
HMGB2-201ENST00000296503 GNA12Q03113 381 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 SPEM2Q0P670 501 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 DLG2Q15700 870 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 SLC36A4Q6YBV0 504 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 ZNF783Q6ZMS7 281 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 LPCAT2Q7L5N7 544 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 TMEFF1Q8IYR6 380 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 DEFB119Q8N690 84 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 TC2NQ8N9U0 490 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 ATP11CQ8NB49 1132 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 LOXL4Q96JB6 756 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 SNRNP25Q9BV90 132 aaKnown RBP12.37□□□□□ -0.43
HMGB2-201ENST00000296503 PARD6BQ9BYG5 372 aa12.37□□□□□ -0.43
HMGB2-201ENST00000296503 CATSPERBQ9H7T0 1116 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms