RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 DMTF1Q9Y222 760 aa14.99□□□□□ -0.01
CCNF-201ENST00000293968 TPST1O60507 370 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 ALDH1A2O94788 518 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 GMPSP49915 693 aaPredicted RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 IL23RQ5VWK5 629 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 LPCAT2Q7L5N7 544 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 CHST13Q8NET6 341 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 DCUN1D5Q9BTE7 237 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 SNX25Q9H3E2 840 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 IL1RL2Q9HB29 575 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 DNAAF2Q9NVR5 837 aaKnown RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 C19orf81C9J6K1 198 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 ONECUT3O60422 494 aaPredicted RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 MLNP12872 115 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 INSRRP14616 1297 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 PCSK6P29122 969 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 LIMK2P53671 638 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 ZFP1Q6P2D0 407 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 KLC3Q6P597 504 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 MTMR14Q8NCE2 650 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 PDZD7Q9H5P4 517 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 ASB7Q9H672 318 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 COL11A2P13942 1736 aaPredicted RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 KCNU1A8MYU2 1149 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 CASQ2O14958 399 aaPredicted RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 TRMUO75648 421 aaKnown RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 JUNP05412 331 aaKnown RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 HNRNPLP14866 589 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCNF-201ENST00000293968 PTPN1P18031 435 aaKnown RBP14.98□□□□□ -0.01
CCNF-201ENST00000293968 PROZP22891 400 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 RABGGTBP53611 331 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 HPCAP84074 193 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 STEAP4Q687X5 459 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 SLC2A14Q8TDB8 520 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 LRTOMTQ8WZ04 291 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 CCDC167Q9P0B6 97 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 RAP2CQ9Y3L5 183 aa14.98□□□□□ -0.01
CCNF-201ENST00000293968 G3V2L1 256 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 DPYSL4O14531 572 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 MAGEB3O15480 346 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 MCF2P10911 925 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 GRM3Q14832 879 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 SLC41A1Q8IVJ1 513 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 DDI1Q8WTU0 396 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 KHSRPQ92945 711 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCNF-201ENST00000293968 HAUS8Q9BT25 410 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 MED10Q9BTT4 135 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 FAM49AQ9H0Q0 323 aaPredicted RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 MTMR10Q9NXD2 777 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 AURKCQ9UQB9 309 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 DENRO43583 198 aaKnown RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 RNASEH2AO75792 299 aaKnown RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 PRDX6P30041 224 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 SLC12A2P55011 1212 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 NR1H2P55055 460 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 NME5P56597 212 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 ADIGQ0VDE8 80 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 MYBPC3Q14896 1274 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 TRIM67Q6ZTA4 783 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 SPNS2Q8IVW8 549 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 EXOC8Q8IYI6 725 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 ADCY4Q8NFM4 1077 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 C18orf25Q96B23 403 aaPredicted RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 TMIGD2Q96BF3 282 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 KLHL32Q96NJ5 620 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 CIB1Q99828 191 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 PDGFDQ9GZP0 370 aaPredicted RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 CXCL16Q9H2A7 254 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 COQ10BQ9H8M1 238 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 TRPC7Q9HCX4 862 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 AKAP10O43572 662 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 GAS2O43903 313 aaKnown RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 MPOP05164 745 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 CDH15P55291 814 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 DCTN2Q13561 401 aaKnown RBP14.97□□□□□ -0.01
CCNF-201ENST00000293968 SLC35F5Q8WV83 523 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 LRRC4Q9HBW1 653 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 SNTG2Q9NY99 539 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 KLK14Q9P0G3 267 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 MID2Q9UJV3 735 aa14.97□□□□□ -0.01
CCNF-201ENST00000293968 TMEM114B3SHH9 223 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 ARSAP15289 507 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 PLK1P53350 603 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 PRKAA1Q13131 559 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 GEN1Q17RS7 908 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 ZNF423Q2M1K9 1284 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 ZBTB46Q86UZ6 589 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 R3HDMLQ9H3Y0 253 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 SMARCAD1Q9H4L7 1026 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 TUBGCP4Q9UGJ1 667 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 HDCP19113 662 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 METTL21CQ5VZV1 264 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 TMEM110Q86TL2 294 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 SLC7A14Q8TBB6 771 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 MPHOSPH6Q99547 160 aaKnown RBP14.96□□□□□ -0.01
CCNF-201ENST00000293968 XPR1Q9UBH6 696 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 AP4S1Q9Y587 144 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 KIAA1217Q5T5P2 1943 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 SAC3D1A6NKF1 404 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms