RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CSH1P0DML2 217 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 CSH2P0DML3 217 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 IL2P60568 153 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 PLPP4Q5VZY2 271 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF621Q6ZSS3 439 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 TMEM132CQ8N3T6 1108 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHANK1-201ENST00000293441 CYP1A1P04798 512 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-201ENST00000293441 UMPSP11172 480 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 GSSP48637 474 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 CNGA2Q16280 664 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 FGD3Q5JSP0 725 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 COLGALT2Q8IYK4 626 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 IL31RAQ8NI17 732 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 CHST7Q9NS84 486 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 PABPC1P11940 636 aaKnown RBP17.55■□□□□ 0.4
SHANK1-201ENST00000293441 HSPA14Q0VDF9 509 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 PHACTR1Q9C0D0 580 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 SEMA4BQ9NPR2 832 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-201ENST00000293441 STK39Q9UEW8 545 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 C1QTNF3-AMACRE9PGA6 284 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 RANBP1P43487 201 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 PSMD5Q16401 504 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 TCHHL1Q5QJ38 904 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-201ENST00000293441 KATNAL2Q8IYT4 538 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 POMGNT2Q8NAT1 580 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 KYQ8NBH2 561 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 RSPH1Q8WYR4 309 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 SALL3Q9BXA9 1300 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF135P52742 658 aaPredicted RBP17.54■□□□□ 0.4
SHANK1-201ENST00000293441 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 NT5DC1Q5TFE4 455 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
SHANK1-201ENST00000293441 GNPTGQ9UJJ9 305 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 B4GALT5O43286 388 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF862O60290 1169 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 SPIDRQ14159 915 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 TTC7BQ86TV6 843 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 HAS1Q92839 578 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 COL26A1Q96A83 441 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 CROTQ9UKG9 612 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 SPATA31C2B4DYI2 1134 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 TPP1O14773 563 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 GTF2BQ00403 316 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 BNIPLQ7Z465 357 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 CYP4X1Q8N118 509 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 TMEM161BQ8NDZ6 487 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 CAVIN3Q969G5 261 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 MRIQ9BWK5 157 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ATP13A3Q9H7F0 1226 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 AASDHPPTQ9NRN7 309 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 N6AMT1Q9Y5N5 214 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 A0A088AWK7 358 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF10P21506 573 aaPredicted RBP17.54■□□□□ 0.4
SHANK1-201ENST00000293441 PRKAA2P54646 552 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 SKP1P63208 163 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF544Q6NX49 715 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 FAM126BQ8IXS8 530 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 FUT8Q9BYC5 575 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 PAPOLBQ9NRJ5 636 aaKnown RBP17.54■□□□□ 0.4
SHANK1-201ENST00000293441 THAP1Q9NVV9 213 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 CCDC167Q9P0B6 97 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 LIMD1Q9UGP4 676 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 DUSP12Q9UNI6 340 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 POLR1DQ9Y2S0 133 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 STARD13Q9Y3M8 1113 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 INPP4BO15327 924 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 ELNP15502 786 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 NFKB1P19838 968 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 SCTRP47872 440 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 NSMCE2Q96MF7 247 aa17.54■□□□□ 0.4
SHANK1-201ENST00000293441 TK2O00142 265 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 CNOT3O75175 753 aaKnown RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 CHKAP35790 457 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 PAGE2BQ5JRK9 111 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 DCLRE1AQ6PJP8 1040 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 ZBTB49Q6ZSB9 765 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 PIGZQ86VD9 579 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 FBXO6Q9NRD1 293 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 TMPRSS4Q9NRS4 437 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 BTBD7Q9P203 1132 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 HOMEZQ8IX15 550 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 KLHL4Q9C0H6 718 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 ALG9Q9H6U8 611 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 CCNB1P14635 433 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 FLT3LGP49771 235 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 SLC4A9Q96Q91 983 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 IL22Q9GZX6 179 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 RSPH9Q9H1X1 276 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 FCGR1AP12314 374 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 PFKFB4Q16877 469 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 C16orf46Q6P387 395 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 EID3Q8N140 333 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 NAT16Q8N8M0 369 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 DNAJC1Q96KC8 554 aaKnown RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 SNRNP25Q9BV90 132 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms