RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 DEUP1Q05D60 604 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 DLG2Q15700 870 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 SLC25A52Q3SY17 297 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 CDKAL1Q5VV42 579 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.91■■□□□ 1.74
U2AF1-201ENST00000291552 ERICH1Q86X53 443 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 SH2D3CQ8N5H7 860 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 SLC20A1Q8WUM9 679 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 OR8D1Q8WZ84 308 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 ACE2Q9BYF1 805 aaPredicted RBP25.91■■□□□ 1.74
U2AF1-201ENST00000291552 STK33Q9BYT3 514 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 TMEM59LQ9UK28 342 aa25.91■■□□□ 1.74
U2AF1-201ENST00000291552 NOCTQ9UK39 431 aaKnown RBP25.91■■□□□ 1.74
U2AF1-201ENST00000291552 RALYQ9UKM9 306 aaKnown RBP25.91■■□□□ 1.74
U2AF1-201ENST00000291552 A0A1B0GTQ1 180 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 SRRM3A6NNA2 597 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-201ENST00000291552 LATO43561 262 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 LSM8O95777 96 aaKnown RBP25.9■■□□□ 1.74
U2AF1-201ENST00000291552 MT-CO1P00395 513 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 SRCP12931 536 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 SHBQ15464 509 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 POM121L1PQ3SYA9 428 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 CT47A1Q5JQC4 288 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-201ENST00000291552 PRAMEF14Q5SWL7 426 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 AGBL4Q5VU57 503 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 ZNF212Q9UDV6 495 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 PPM1HQ9ULR3 514 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 HS3ST2Q9Y278 367 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 LAMA5O15230 3695 aa25.9■■□□□ 1.74
U2AF1-201ENST00000291552 IGLV3-10A0A075B6K4 115 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 DRGXA6NNA5 263 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 GOLGA8SH3BPF8 625 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 EPHB6O15197 1021 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 C21orf59P57076 290 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 CNTN1Q12860 1018 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 ACCSLQ4AC99 568 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 NAA35Q5VZE5 725 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 CPA5Q8WXQ8 436 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 CDC6Q99741 560 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 MUC3BQ9H195 1237 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 AASDHPPTQ9NRN7 309 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 MPP6Q9NZW5 540 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 ARHGAP20Q9P2F6 1191 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 VPS51Q9UID3 782 aa25.89■■□□□ 1.74
U2AF1-201ENST00000291552 K7ERQ8 282 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 MCF2LO15068 1137 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 PLRG1O43660 514 aaKnown RBP25.88■■□□□ 1.73
U2AF1-201ENST00000291552 CTSLP07711 333 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 RHOCP08134 193 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 CD38P28907 300 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 GRK6P43250 576 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 SUZ12Q15022 739 aaKnown RBP25.88■■□□□ 1.73
U2AF1-201ENST00000291552 KRT31Q15323 416 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 RAB6CQ53S08 254 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 CCNI2Q6ZMN8 369 aaPredicted RBP25.88■■□□□ 1.73
U2AF1-201ENST00000291552 PIP4K2CQ8TBX8 421 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 ENOX1Q8TC92 643 aaKnown RBP25.88■■□□□ 1.73
U2AF1-201ENST00000291552 SERAC1Q96JX3 654 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 CFAP57Q96MR6 1250 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 PPP1R9BQ96SB3 815 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 RAB6CQ9H0N0 254 aa25.88■■□□□ 1.73
U2AF1-201ENST00000291552 KNTC1P50748 2209 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 A0A0D9SEW6 157 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 RNF103O00237 685 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 TAF4O00268 1085 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 ALOX15BO15296 676 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 F9P00740 461 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 CHRNB2P17787 502 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 RBM43Q6ZSC3 357 aaKnown RBP25.87■■□□□ 1.73
U2AF1-201ENST00000291552 TFAP2DQ7Z6R9 452 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 DSG4Q86SJ6 1040 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 GATAD2AQ86YP4 633 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 GPT2Q8TD30 523 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 ELF4Q99607 663 aaPredicted RBP25.87■■□□□ 1.73
U2AF1-201ENST00000291552 VPS16Q9H269 839 aa25.87■■□□□ 1.73
U2AF1-201ENST00000291552 ITPR1Q14643 2758 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3DA0A087WVF3 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3IA0A087WXS9 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3EA0A087X179 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3KA0A087X1G2 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3FA6NER0 549 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-201ENST00000291552 GOLGA8CPA6NN73 597 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3LB9A6J9 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 E9PAM4 449 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 SLC7A4O43246 635 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 SMAD6O43541 496 aaKnown RBP25.86■■□□□ 1.73
U2AF1-201ENST00000291552 GFPT2O94808 682 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3HP0C7X1 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 GLDCP23378 1020 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 RRM1P23921 792 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 JAM2P57087 298 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TAS2R38P59533 333 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 FMO1Q01740 532 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3GQ6DHY5 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3CQ6IPX1 549 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 LRSAM1Q6UWE0 723 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 SETD3Q86TU7 594 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-201ENST00000291552 TBC1D3Q8IZP1 549 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-201ENST00000291552 EMC1Q8N766 993 aa25.86■■□□□ 1.73
U2AF1-201ENST00000291552 DCAF4L2Q8NA75 395 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms