RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 RAB6CQ9H0N0 254 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 RHOJQ9H4E5 214 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.771e-7■■■■■ 33.3
HMGCR-201ENST00000287936 DNAJB4Q9UDY4 337 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 CPA4Q9UI42 421 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 A0A087X1B8 175 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 RBM47A0AV96 593 aaKnown RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 PIGNO95427 931 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 HSPA13P48723 471 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 POLD2P49005 469 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 DYNC1I2Q13409 638 aaKnown RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 PDCD2Q16342 344 aaPredicted RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 PCSK7Q16549 785 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 KIF19Q2TAC6 998 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 LIPMQ5VYY2 423 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 DCLRE1AQ6PJP8 1040 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 CDHR3Q6ZTQ4 885 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 LRRC49Q8IUZ0 686 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 RYBPQ8N488 228 aaPredicted RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 PPWD1Q96BP3 646 aaKnown RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 NPY6RQ99463 290 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 COLEC11Q9BWP8 271 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 HDAC3O15379 428 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 SIN3BO75182 1162 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 C2P06681 752 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 COL6A2P12110 1019 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 VAV1P15498 845 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 IL4RP24394 825 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 CDC25CP30307 473 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 POU6F1Q14863 301 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 TLDC1Q6P9B6 456 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 TMA16Q96EY4 203 aaKnown RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 C1orf21Q9H246 121 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 ABCC13Q9NSE7 274 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 TMEM216Q9P0N5 145 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 FBXW11Q9UKB1 542 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 GIT1Q9Y2X7 761 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 CHEK2O96017 543 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 HTR7P34969 479 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 FKBP1BP68106 108 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 XIAPP98170 497 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 PPIDQ08752 370 aaKnown RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 ZNF235Q14590 738 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
HMGCR-201ENST00000287936 OVOS1Q6IE37 1185 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 DHDDSQ86SQ9 333 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 NETO2Q8NC67 525 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 EXT2Q93063 718 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 ZNF333Q96JL9 665 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 ADAMTS10Q9H324 1103 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 CHST12Q9NRB3 414 aa10.23□□□□□ -0.77
HMGCR-201ENST00000287936 FAM95CA0A1B0GW59 222 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 ZBTB24O43167 697 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PDE5AO76074 875 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 VAPBO95292 243 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 BRMS1LQ5PSV4 323 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 ZFP1Q6P2D0 407 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 ATP6V0D2Q8N8Y2 350 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 MYLPFQ96A32 169 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PABPC5Q96DU9 382 aaKnown RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 RTKNQ9BST9 563 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 NUF2Q9BZD4 464 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PRPF19Q9UMS4 504 aaKnown RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PSME4Q14997 1843 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 HEATR9A2RTY3 570 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 SNAI1O95863 264 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 AKR1A1P14550 325 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 AOC1P19801 751 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 SLC10A2Q12908 348 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PKDCCQ504Y2 493 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 CMPK2Q5EBM0 449 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PPM1JQ5JR12 505 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 TRNP1Q6NT89 227 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 POTEHQ6S545 545 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 MAMDC4Q6UXC1 1216 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 SNX32Q86XE0 403 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 SLC22A9Q8IVM8 553 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 SERPINB11Q96P15 392 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 ECSITQ9BQ95 431 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 FAM192AQ9GZU8 254 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 FAM105AQ9NUU6 356 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 HACD3Q9P035 362 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 KIAA1217Q5T5P2 1943 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PHGDHO43175 533 aaKnown RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 TREHO43280 583 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 FGFR1P11362 822 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 BDNFP23560 247 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 BEX3Q00994 111 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 CERCAMQ5T4B2 595 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 MBLAC2Q68D91 279 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 CCDC117Q8IWD4 279 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 TNS4Q8IZW8 715 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms