RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GALNT8Q9NY28 637 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 HES2Q9Y543 173 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 IPPQ9Y573 584 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 HMX2A2RU54 273 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ARHGAP42A6NI28 874 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 CXorf49A8MYA2 514 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 K7ERI5 159 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ZNF195O14628 629 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ALDH1A2O94788 518 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 RFC1P35251 1148 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SLC25A3Q00325 362 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SFSWAPQ12872 951 aaKnown RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 RFX8Q6ZV50 586 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SATL1Q86VE3 508 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ADGRF2Q8IZF7 708 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 ABI1Q8IZP0 508 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 PQLC1Q8N2U9 271 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SPATA18Q8TC71 538 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 PYDC1Q8WXC3 89 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 PGBD4Q96DM1 585 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 MCRS1Q96EZ8 462 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 C20orf27Q9GZN8 174 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 HAPLN2Q9GZV7 340 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 KLC2Q9H0B6 622 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 NXF3Q9H4D5 531 aaKnown RBP10.55□□□□□ -0.72
UPF3B-201ENST00000276201 CWH43Q9H720 699 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 PREBQ9HCU5 417 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 SMYD2Q9NRG4 433 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 MOCS1Q9NZB8 636 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
UPF3B-201ENST00000276201 C5orf67F2Z3F1 127 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DNAJA2O60884 412 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 CLPTM1O96005 669 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ALDH1A3P47895 512 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SERPINB8P50452 374 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 HK2P52789 917 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 USP46P62068 366 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 CYLC2Q14093 348 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 TRIP10Q15642 601 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 FASTKD1Q53R41 847 aaKnown RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 LPCAT4Q643R3 524 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 LMBRD2Q68DH5 695 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 FBXL19Q6PCT2 694 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DARS2Q6PI48 645 aaKnown RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 GLB1LQ6UWU2 654 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 KCTD6Q8NC69 237 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SLC26A7Q8TE54 656 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 EBNA1BP2Q99848 306 aaKnown RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 EBF4Q9BQW3 602 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 CISHQ9NSE2 258 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 TBCCD1Q9NVR7 557 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ASNSD1Q9NWL6 643 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DCDC2Q9UHG0 476 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ARHGAP26Q9UNA1 814 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 H3BNC9 293 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SPATA31D3P0C874 917 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 IGFBP4P22692 258 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SLC1A6P48664 564 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 IDH3AP50213 366 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 AFF1P51825 1210 aaKnown RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 RAB15P59190 212 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DYNLT1P63172 113 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 PDK2Q15119 407 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 PTPN20Q4JDL3 420 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 NOMO2Q5JPE7 1267 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ATF7IP2Q5U623 682 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 UNC5AQ6ZN44 842 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SPATA31D4Q6ZUB0 917 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 CTAGE3PQ8IX95 158 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 NDUFAF2Q8N183 169 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 COLGALT1Q8NBJ5 622 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 OR5B17Q8NGF7 314 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DLG3Q92796 817 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ACSF2Q96CM8 615 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 CFAP36Q96G28 342 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DCUN1D1Q96GG9 259 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SIGLEC10Q96LC7 697 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 PLEKHG4BQ96PX9 1271 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SERPINI1Q99574 410 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 SAE1Q9UBE0 346 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-201ENST00000276201 STK39Q9UEW8 545 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 DNAJC16Q9Y2G8 782 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 INPP5FQ9Y2H2 1132 aa10.54□□□□□ -0.72
UPF3B-201ENST00000276201 PRRC2BQ5JSZ5 2229 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 PLIN3O60664 434 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 COQ9O75208 318 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 STK10O94804 968 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 FBXO21O94952 628 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 RB1P06400 928 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 CSH1P0DML2 217 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 CSH2P0DML3 217 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms