RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 KCTD4Q8WVF5 259 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF670Q9BS34 389 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ACE2Q9BYF1 805 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ACAD9Q9H845 621 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 IL1RL2Q9HB29 575 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 CCDC167Q9P0B6 97 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 BRCA2P51587 3418 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 MATN2O00339 956 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 PPEF2O14830 753 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 B4GALT4O60513 344 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 TIPRLO75663 272 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 CCDC166P0CW27 439 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ALOX15P16050 662 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ACAT1P24752 427 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 NME5P56597 212 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 SLC6A3Q01959 620 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 APOFQ13790 326 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 DGKDQ16760 1214 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 GLRA4Q5JXX5 417 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 TMEM102Q8N9M5 508 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 FAM96AQ9H5X1 160 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 GTSE1Q9NYZ3 720 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 KLHL8Q9P2G9 620 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 AP4S1Q9Y587 144 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 NEMP2A6NFY4 417 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 E7ENX8 843 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 GRID2O43424 1007 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 GNAO1P09471 354 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF26P17031 533 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 SPRP35270 261 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 RABGGTBP53611 331 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 NME3Q13232 169 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 TARBP2Q15633 366 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 XRRA1Q6P2D8 792 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 POTEHQ6S545 545 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 KDELC2Q7Z4H8 507 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF567Q8N184 647 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF786Q8N393 782 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 QKIQ96PU8 341 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 NIFKQ9BYG3 293 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 DPEP3Q9H4B8 488 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 EFCAB1Q9HAE3 211 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 CYP4F12Q9HCS2 524 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 RUVBL2Q9Y230 463 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 COPG1Q9Y678 874 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 KPNA7A9QM74 516 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 C9JVG2 144 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 NRP1O14786 923 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 CCDC130P13994 396 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
COL8A1-202ENST00000273342 SURF1Q15526 300 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TREML2Q5T2D2 321 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TICAM1Q8IUC6 712 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 OR6B3Q8NGW1 331 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 RP9Q8TA86 221 aaKnown RBP13.14□□□□□ -0.31
COL8A1-202ENST00000273342 DDI1Q8WTU0 396 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TBCBQ99426 244 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 GMLQ99445 158 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 RBBP8Q99708 897 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 PRPF19Q9UMS4 504 aaKnown RBP13.14□□□□□ -0.31
COL8A1-202ENST00000273342 CDYLQ9Y232 598 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 PRSS51A0A1B0GVH4 220 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TSPAN8P19075 237 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 ARL4AP40617 200 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 GRM3Q14832 879 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 RPL10LQ96L21 214 aaKnown RBP13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TRIM8Q9BZR9 551 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TIMMDC1Q9NPL8 285 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 TLK1Q9UKI8 766 aa13.14□□□□□ -0.31
COL8A1-202ENST00000273342 ATP6AP2A0A1C7CYW4 349 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ZNF839A8K0R7 811 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ATP6AP2O75787 350 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PLK1P53350 603 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 SLC5A3P53794 718 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 BACE1P56817 501 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 USP10Q14694 798 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 STEAP4Q687X5 459 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 LRRC8EQ6NSJ5 796 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 EFCAB12Q6NXP0 572 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 CHST15Q7LFX5 561 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ZNF554Q86TJ5 538 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms