RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 VTI1BQ9UEU0 232 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 IGFBP4P22692 258 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 GRK3P35626 688 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 PLK1P53350 603 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 NDRG1Q92597 394 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 PWWP2AQ96N64 755 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 PANX3Q96QZ0 392 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 MPP6Q9NZW5 540 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 GNG14A0A1W2PPG7 69 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 CCNT2O60583 730 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 CXCL14O95715 111 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 SHBGP04278 402 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 INHAP05111 366 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ALADP13716 330 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 SKIV2L2P42285 1042 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 CHRNB3Q05901 458 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 UNC5AQ6ZN44 842 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ZCCHC23Q6ZST2 131 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 NECAB2Q7Z6G3 386 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ACTL7BQ9Y614 415 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 SLC9A3R1O14745 358 aaPredicted RBP15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TLL1O43897 1013 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 ALBP02768 609 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 ABHD2P08910 425 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TP53BP2Q13625 1128 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 PMF1Q6P1K2 205 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 VSTM1Q6UX27 236 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 PPP1R10Q96QC0 940 aaKnown RBP15.65■□□□□ 0.1
TIMP3-201ENST00000266085 WDR41Q9HAD4 459 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 APOBEC3GQ9HC16 384 aaKnown RBP15.65■□□□□ 0.1
TIMP3-201ENST00000266085 PIAS1O75925 651 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 NUDT17P0C025 328 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 ACADMP11310 421 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TSHRP16473 764 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 GPC1P35052 558 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 XYLT1Q86Y38 959 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 P3H2Q8IVL5 708 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 KYQ8NBH2 561 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 DBF4BQ8NFT6 615 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 EXOC2Q96KP1 924 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TRMT13Q9NUP7 481 aaKnown RBP15.65■□□□□ 0.1
TIMP3-201ENST00000266085 ZNF446Q9NWS9 450 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 IFRD1O00458 451 aaPredicted RBP15.65■□□□□ 0.1
TIMP3-201ENST00000266085 SPATA31D3P0C874 917 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 MAXP61244 160 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 PLOD1Q02809 727 aaPredicted RBP15.65■□□□□ 0.1
TIMP3-201ENST00000266085 LRRC8BQ6P9F7 803 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 SPATA31D4Q6ZUB0 917 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TMPRSS6Q8IU80 811 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 MCOLN3Q8TDD5 553 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TFAP2BQ92481 460 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 PLEKHA8Q96JA3 519 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 VPS50Q96JG6 964 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 SH3GL1Q99961 368 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 TTYH3Q9C0H2 523 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 MID1IP1Q9NPA3 183 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.65■□□□□ 0.11e-7■■■□□ 19.1
TIMP3-201ENST00000266085 EFR3BQ9Y2G0 817 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 DTNAQ9Y4J8 743 aa15.65■□□□□ 0.1
TIMP3-201ENST00000266085 PDZK1P1A8MUH7 402 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TMEM114B3SHH9 223 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 LRCH4O75427 683 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 OR56A5P0C7T3 313 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 CYP51A1Q16850 503 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TRMT11Q7Z4G4 463 aaKnown RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 DSG4Q86SJ6 1040 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SYTL1Q8IYJ3 562 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 STK40Q8N2I9 435 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SLC4A11Q8NBS3 891 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 METTL6Q8TCB7 284 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 FNIP1Q8TF40 1166 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SUSD6Q92537 303 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 CASP10Q92851 521 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 ERLEC1Q96DZ1 483 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 BTN3A1O00481 513 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 MSI1O43347 362 aaKnown RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 CYP2A7P20853 494 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 FNDC3BQ53EP0 1204 aaKnown RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TTMPQ5BVD1 217 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 BRMS1LQ5PSV4 323 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 CES5AQ6NT32 575 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 C16orf87Q6PH81 154 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 OTOP2Q7RTS6 562 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 DEFB107AQ8IZN7 70 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 JADE3Q92613 823 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TEPSINQ96N21 525 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 EBNA1BP2Q99848 306 aaKnown RBP15.64■□□□□ 0.09
TIMP3-201ENST00000266085 HSD3B7Q9H2F3 369 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 ACSS3Q9H6R3 686 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 FAM50BQ9Y247 325 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TOPAZ1Q8N9V7 1692 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 TBL1XO60907 577 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 GABRR2P28476 465 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SERPINB3P29508 390 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 CNTN1Q12860 1018 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 CDC16Q13042 620 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 C16orf46Q6P387 395 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 SNX27Q96L92 541 aa15.64■□□□□ 0.09
TIMP3-201ENST00000266085 NR1H4Q96RI1 486 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms