RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CEP295Q9C0D2 2601 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 PPARGC1AQ9UBK2 798 aaKnown RBP16.49■□□□□ 0.23
USE1-201ENST00000263897 ZNF212Q9UDV6 495 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 OR12D3Q9UGF7 316 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 HS3ST2Q9Y278 367 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 EPG5Q9HCE0 2579 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 A0A0D9SEW6 157 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 A0A1B0GVT2 93 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 ILVBLA1L0T0 632 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SIGLEC16A6NMB1 481 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 C10orf142B7Z368 130 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SNAP91O60641 907 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SRCP12931 536 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SHC2P98077 582 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 NRG1Q02297 640 aaPredicted RBP16.48■□□□□ 0.23
USE1-201ENST00000263897 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
USE1-201ENST00000263897 ZNF252P-AS1Q0IIN9 211 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 CDO1Q16878 200 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 FILIP1LQ4L180 1135 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 IL27RAQ6UWB1 636 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 MON1BQ7L1V2 547 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 C3orf20Q8ND61 904 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 OR2T34Q8NGX1 318 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 OR8D1Q8WZ84 308 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SELENOOQ9BVL4 669 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 ZYG11BQ9C0D3 744 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 OSBPL2Q9H1P3 480 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 GAREM1Q9H706 876 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 TM9SF3Q9HD45 589 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SEPT11Q9NVA2 429 aaKnown RBP16.48■□□□□ 0.23
USE1-201ENST00000263897 VPS51Q9UID3 782 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 ANGPTL2Q9UKU9 493 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 SARDHQ9UL12 918 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 PPM1HQ9ULR3 514 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 MYO6Q9UM54 1294 aa16.48■□□□□ 0.23
USE1-201ENST00000263897 A0A1W2PPC4 97 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 TCRBV5S1A1TA0A578 114 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 ALOX15BO15296 676 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 DRD3P35462 400 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 CCR5P51681 352 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 HDAC4P56524 1084 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 IQCB1Q15051 598 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 TEAD4Q15561 434 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 HLA-BQ31612 363 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 FAM46CQ5VWP2 391 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.47■□□□□ 0.23
USE1-201ENST00000263897 ZNF783Q6ZMS7 281 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 Q6ZVU0 165 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 DCAF4L2Q8NA75 395 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 ATP11CQ8NB49 1132 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 OR7D4Q8NG98 312 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 OR14C36Q8NHC7 312 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 BAP1Q92560 729 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 FUCA2Q9BTY2 467 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 RETREG1Q9H6L5 497 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 IL21RQ9HBE5 538 aa16.47■□□□□ 0.23
USE1-201ENST00000263897 NYNRINQ9P2P1 1898 aaKnown RBP16.47■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3DA0A087WVF3 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3IA0A087WXS9 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3EA0A087X179 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3KA0A087X1G2 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3FA6NER0 549 aaPredicted RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3LB9A6J9 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 K7ERQ8 282 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 SMAD6O43541 496 aaKnown RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 SH3BP5O60239 455 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 CER1O95813 267 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3HP0C7X1 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 ZNF883P0CG24 379 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TNFAIP3P21580 790 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 GPD1P21695 349 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 GRIA4P48058 902 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 METAP1P53582 386 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 RACK1P63244 317 aaKnown RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 SLC20A2Q08357 652 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 HNRNPDQ14103 355 aaKnown RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 KIF19Q2TAC6 998 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 MANEALQ5VSG8 457 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3GQ6DHY5 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3CQ6IPX1 549 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 MCOLN2Q8IZK6 566 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 TBC1D3Q8IZP1 549 aaPredicted RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 PIP4K2CQ8TBX8 421 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 FAM172AQ8WUF8 416 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 FAM131CQ96AQ9 280 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 SYT11Q9BT88 431 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 MAGEB5Q9BZ81 275 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 EBF2Q9HAK2 575 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 ANKRD6Q9Y2G4 727 aa16.46■□□□□ 0.23
USE1-201ENST00000263897 FARP1Q9Y4F1 1045 aaPredicted RBP16.46■□□□□ 0.23
USE1-201ENST00000263897 A0A1B0GTH6 734 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 SPAARA0A1B0GVQ0 90 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 A0A1W2PQC6 194 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 FAM72CH0Y354 149 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 CBX4O00257 560 aa16.45■□□□□ 0.22
USE1-201ENST00000263897 PLK4O00444 970 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms