RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ERI2A8K979 691 aaKnown RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 H3BQF6 201 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 NEBLO76041 1014 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 SYF2O95926 243 aaKnown RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ABHD2P08910 425 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 NFKB1P19838 968 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 SGSHP51688 502 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 GNA12Q03113 381 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 IL10RBQ08334 325 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF844Q08AG5 666 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 HNRNPDQ14103 355 aaKnown RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 PRPSAP1Q14558 356 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 SLC5A9Q2M3M2 681 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 MSS51Q4VC12 460 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 CEP85LQ5SZL2 805 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 TDHQ8IZJ6 230 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 CNTD1Q8N815 330 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 OR2W6PQ8NHA6 318 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 USP33Q8TEY7 942 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 DZANK1Q9NVP4 752 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 E2F8A0AVK6 867 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GOLGA6CA6NDK9 693 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GOLGA6L10A6NI86 522 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 F5H423 210 aaPredicted RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 PEX11BO96011 259 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 RHOCP08134 193 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GOLGA6DP0CG33 693 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 MLNP12872 115 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 IFNAR2P48551 515 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 RENBPP51606 427 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 NTHL1P78549 312 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 FASTKD3Q14CZ7 662 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 UBAP2Q5T6F2 1119 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 CAND1Q86VP6 1230 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 PDCD7Q8N8D1 485 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 SH3RF2Q8TEC5 729 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 PYROXD1Q8WU10 500 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 SMG7Q92540 1137 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 ZBTB9Q96C00 473 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 MRPL38Q96DV4 380 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 TMA16Q96EY4 203 aaKnown RBP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 SFXN1Q9H9B4 322 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 RBM22Q9NW64 420 aaKnown RBP eCLIP13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GOLGA6AQ9NYA3 693 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GOLGA8KD6RF30 607 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 J3KR12 359 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 PSMD3O43242 534 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 CACNG3O60359 315 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 PRAMEF11O60813 436 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 TBL1XO60907 577 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 AP2A1O95782 977 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 TSHRP16473 764 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 ACVRL1P37023 503 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 ETFBP38117 255 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 MAGEA3P43357 314 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 CCDC38Q502W7 563 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF783Q6ZMS7 281 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 LRRC39Q96DD0 335 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 GLOD4Q9HC38 313 aa13.28□□□□□ -0.28
VAMP7-201ENST00000262640 NUP205Q92621 2012 aa13.27□□□□□ -0.28
VAMP7-201ENST00000262640 SCAMP3O14828 347 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 BANF1O75531 89 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 SUN1O94901 812 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 SHBGP04278 402 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 MYZAPP0CAP1 466 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 OAS2P29728 719 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 TNK2Q07912 1038 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 KCNC3Q14003 757 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 MARC1Q5VT66 337 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 LRRC8BQ6P9F7 803 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ZNF534Q76KX8 674 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 KLHDC8BQ8IXV7 354 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ATP11CQ8NB49 1132 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 FBXO36Q8NEA4 188 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 TTC16Q8NEE8 873 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ZNF599Q96NL3 588 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 FCRL5Q96RD9 977 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 TDP1Q9NUW8 608 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 NYNRINQ9P2P1 1898 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 A0A087WUV0 522 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ANXA9O76027 345 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 TEX26Q8N6G2 289 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 TDRD5Q8NAT2 981 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 UHMK1Q8TAS1 419 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 USP13Q92995 863 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms