RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CDH24Q86UP0 819 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF227Q86WZ6 799 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF248Q8NDW4 579 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 OR9A1PQ8NGU1 263 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 USP13Q92995 863 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF669Q96BR6 464 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 AP5M1Q9H0R1 490 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 COG4Q9H9E3 785 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 AGO3Q9H9G7 860 aaKnown RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PRDM8Q9NQV8 689 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 NYAP2Q9P242 653 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 GRHPRQ9UBQ7 328 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 IPO11Q9UI26 975 aaKnown RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 CNOT11Q9UKZ1 510 aaKnown RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ST14Q9Y5Y6 855 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PSAT1Q9Y617 370 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 RIMS2Q9UQ26 1411 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 DIP2CQ9Y2E4 1556 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 A0A0G2JMP0 313 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 C2orf74A8MZ97 194 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PODXLO00592 558 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 DCLK1O15075 740 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 DYRK3O43781 588 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 EPOP01588 193 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 XPAP23025 273 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 RBL1P28749 1068 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 MMP13P45452 471 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 GNG10P50151 68 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 SPIRE1Q08AE8 756 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 STX5Q13190 355 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 APOFQ13790 326 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 SAPCD1Q5SSQ6 148 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 CYB5R2Q6BCY4 276 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ZCCHC12Q6PEW1 402 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 UTS2BQ765I0 119 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 RAB11FIP2Q7L804 512 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 DSG4Q86SJ6 1040 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PRR18Q8N4B5 295 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PI4K2AQ9BTU6 479 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 C12orf49Q9H741 205 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 TRPV4Q9HBA0 871 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 RAVER2Q9HCJ3 691 aaKnown RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 EPB41L5Q9HCM4 733 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 VSX1Q9NZR4 365 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 UXTQ9UBK9 157 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PACSIN2Q9UNF0 486 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PCDHA3Q9Y5H8 950 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 CARMIL3Q8ND23 1372 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 PITPNM2Q9BZ72 1349 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 TP53BP1Q12888 1972 aaPredicted RBP7.87□□□□□ -1.15
GPNMB-201ENST00000258733 ZNF839A8K0R7 811 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 SNAP23O00161 211 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 MFN2O95140 757 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 TNFAIP8O95379 198 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 EYA4O95677 639 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 PDGFAP04085 211 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 CD48P09326 243 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 DDCP20711 480 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 TGM1P22735 817 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 SOX9P48436 509 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 RGS19P49795 217 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 ATP12AP54707 1039 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 MGAT5Q09328 741 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 PRKG2Q13237 762 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 ACVR2BQ13705 512 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 PFKFB4Q16877 469 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 FAM160B1Q5W0V3 765 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 FKBP9P1Q75LS8 142 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 HERC6Q8IVU3 1022 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 LIX1Q8N485 282 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 TMIEQ8NEW7 156 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 METTL21AQ8WXB1 218 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 COPS4Q9BT78 406 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 CCDC86Q9H6F5 360 aaKnown RBP7.87□□□□□ -1.15
GPNMB-201ENST00000258733 OLA1Q9NTK5 396 aaKnown RBP7.87□□□□□ -1.15
GPNMB-201ENST00000258733 UFSP2Q9NUQ7 469 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 ZIM2Q9NZV7 527 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 PCDH10Q9P2E7 1040 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 CDH7Q9ULB5 785 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 COPS3Q9UNS2 423 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 EIF3LQ9Y262 564 aaKnown RBP7.87□□□□□ -1.15
GPNMB-201ENST00000258733 PCDHGB1Q9Y5G3 927 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 CORINQ9Y5Q5 1042 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 AP1M2Q9Y6Q5 423 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 SSH2Q76I76 1423 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 FAM196BA6NMK8 535 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 VSTM5A8MXK1 200 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 A8MXQ7 604 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 USP17L13C9JLJ4 530 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 USP17L17D6RBQ6 530 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 H3BM21 787 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 L7N2F9 121 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 F2P00734 622 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 SERPINB2P05120 415 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 ITGB6P18564 788 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 MX2P20592 715 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 CIITAP33076 1130 aa7.87□□□□□ -1.15
GPNMB-201ENST00000258733 GPC1P35052 558 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms