RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PQLC1Q8N2U9 271 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 GALNT15Q8N3T1 639 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 SPATA22Q8NHS9 363 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 SHKBP1Q8TBC3 707 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 WNT8BQ93098 351 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 DNAJC1Q96KC8 554 aaKnown RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 FAM192AQ9GZU8 254 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 NACA2Q9H009 215 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 TKTL2Q9H0I9 626 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 TXNRD2Q9NNW7 524 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 NCKIPSDQ9NZQ3 722 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 RNF181Q9P0P0 153 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 OR12D3Q9UGF7 316 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 ADAMTSL1Q8N6G6 1762 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 MYOCOSA0A1B0GUC4 107 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 RGSL1A5PLK6 1076 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 HACD1B0YJ81 288 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 BUD23O43709 281 aaKnown RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 SUPT3HO75486 399 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 B3GAT3O94766 335 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 HMBSP08397 361 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 FGF3P11487 239 aaPredicted RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 GFAPP14136 432 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 PSMC3P17980 439 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 TFEBP19484 476 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 IL4RP24394 825 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 NOS2P35228 1153 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 CDK7P50613 346 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 ZNF280AP59817 542 aaPredicted RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 YWHAHQ04917 246 aaPredicted RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 CDH17Q12864 832 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 RALGDSQ12967 914 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 SEMA5AQ13591 1074 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 GRM3Q14832 879 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 PCLAFQ15004 111 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 DPYSL2Q16555 572 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 ANO4Q32M45 955 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 PRAMEF19Q5SWL8 479 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 C6orf52Q5T4I8 152 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 ARMC3Q5W041 872 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 BTBD8Q5XKL5 378 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 MBLAC2Q68D91 279 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 SLC9A4Q6AI14 798 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 RBM44Q6ZP01 1051 aaKnown RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 FASTKD5Q7L8L6 764 aaKnown RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 TFAP2DQ7Z6R9 452 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 METTL23Q86XA0 190 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 DSELQ8IZU8 1212 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 GPRC5AQ8NFJ5 357 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 MZB1Q8WU39 189 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 OPTNQ96CV9 577 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 C12orf42Q96LP6 360 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 ZFP42Q96MM3 310 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 SLC4A5Q9BY07 1137 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 PIF1Q9H611 641 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 TLE6Q9H808 572 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 SARS2Q9NP81 518 aaKnown RBP4.83□□□□□ -1.64
USP44-201ENST00000258499 PFDN4Q9NQP4 134 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 RBM22Q9NW64 420 aaKnown RBP eCLIP4.83□□□□□ -1.64
USP44-201ENST00000258499 AP4B1Q9Y6B7 739 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 STRCQ7RTU9 1775 aa4.83□□□□□ -1.64
USP44-201ENST00000258499 A0A088AWK7 358 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CCDC189A1A4V9 331 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ARHGEF37A1IGU5 675 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 NEMP2A6NFY4 417 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 SAC3D1A6NKF1 404 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 TMEM233B4DJY2 109 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 C9JVG2 144 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 USP2O75604 605 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 MT-CYBP00156 380 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 MYL4P12829 197 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 NPR3P17342 541 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ITGAXP20702 1163 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CCNG1P51959 295 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 GHRHRQ02643 423 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 SLC5A9Q2M3M2 681 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CNPY1Q3B7I2 92 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 LSM12Q3MHD2 195 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 SLC25A52Q3SY17 297 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 C9orf57Q5W0N0 161 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 AAGABQ6PD74 315 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 RAB44Q7Z6P3 723 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 ZBTB46Q86UZ6 589 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 DENND6AQ8IWF6 608 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ZNF786Q8N393 782 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 UBR7Q8N806 425 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 PDCD6IPQ8WUM4 868 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 SLC35F5Q8WV83 523 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CYGBQ8WWM9 190 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 DCUN1D1Q96GG9 259 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 ZMAT2Q96NC0 199 aaKnown RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 SIKE1Q9BRV8 207 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CCDC106Q9BWC9 280 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 AP5M1Q9H0R1 490 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 POMKQ9H5K3 350 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CDHR5Q9HBB8 845 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 GPAMQ9HCL2 828 aa4.82□□□□□ -1.64
USP44-201ENST00000258499 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.82□□□□□ -1.64
USP44-201ENST00000258499 GPRC5DQ9NZD1 345 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms