RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 BCLAF3A2AJT9 711 aaKnown RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF23P17027 643 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 XRCC1P18887 633 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 LRPAP1P30533 357 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 EFEMP1Q12805 493 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 C6orf203Q9P0P8 240 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 CCL22O00626 93 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 KDM1AO60341 852 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 TNFAIP8O95379 198 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 FASP25445 335 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 CDH13P55290 713 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 KCNK10P57789 538 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 CNPY1Q3B7I2 92 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 TBL1YQ9BQ87 522 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ALG9Q9H6U8 611 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 SSU72Q9NP77 194 aaKnown RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 MYO1GB0I1T2 1018 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 GRM3Q14832 879 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 SIX1Q15475 284 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 TRIM16LQ309B1 348 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 LIPMQ5VYY2 423 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 B3GALNT2Q8NCR0 500 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 SLC35B2Q8TB61 432 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 DACT3Q96B18 629 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 GAD1Q99259 594 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 GPR63Q9BZJ6 419 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 GPRC5DQ9NZD1 345 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 PPM1HQ9ULR3 514 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 SCN9AQ15858 1988 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ATP6AP2A0A1C7CYW4 349 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 KDM4FA0A1W2PPD8 638 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 MAGEB16A2A368 324 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ATP6AP2O75787 350 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 BAIAP3O94812 1187 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 LGALS2P05162 132 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 RPS12P25398 132 aaKnown RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 OAZ1P54368 228 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ADARP55265 1226 aaKnown RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 CDC16Q13042 620 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 PPP1R15BQ5SWA1 713 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 MIER2Q8N344 545 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 TSPAN14Q8NG11 270 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ZFRQ96KR1 1074 aaKnown RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 CEP19Q96LK0 163 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 PDGFCQ9NRA1 345 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 LATS2Q9NRM7 1088 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 DDX28Q9NUL7 540 aaKnown RBP4.69□□□□□ -1.66
VPS13C-201ENST00000249837 SPATA31A6Q5VVP1 1343 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 ADAMTSL3P82987 1691 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 LAMB1P07942 1786 aa4.69□□□□□ -1.66
VPS13C-201ENST00000249837 MAFO75444 373 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ESRRBO95718 433 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 LDLRP01130 860 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TMED10P49755 219 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RAD51Q06609 339 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CDH17Q12864 832 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RALGDSQ12967 914 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DDX39BQ13838 428 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DLG2Q15700 870 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DLK2Q6UY11 383 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FAM156AQ8NDB6 213 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TRPM4Q8TD43 1214 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 APBB2Q92870 758 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TRIM62Q9BVG3 475 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DHX33Q9H6R0 707 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 NCKIPSDQ9NZQ3 722 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 HMGXB4Q9UGU5 601 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 DOCK2Q92608 1830 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ITM2AO43736 263 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 KATNA1O75449 491 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TPSB2P20231 275 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PSEN1P49768 467 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SP2Q02086 613 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TPSAB1Q15661 275 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 HSDL1Q3SXM5 330 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CLEC4CQ8WTT0 213 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF512Q96ME7 567 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF670Q9BS34 389 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 GOLGA2P5Q9HBQ8 144 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CCDC88CQ9P219 2028 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 TRIM38O00635 465 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 RBP1P09455 135 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CCNFP41002 786 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MPP1Q00013 466 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 LIN52Q52LA3 116 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ARL13AQ5H913 290 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZFP1Q6P2D0 407 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 MRPS26Q9BYN8 205 aaKnown RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 PIDD1Q9HB75 910 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ANKRD6Q9Y2G4 727 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 SMIM31A0A1B0GVY4 71 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 FAM95CA0A1B0GW59 222 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CILPO75339 1184 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF189O75820 626 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-201ENST00000249837 POMCP01189 267 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 HSPA13P48723 471 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 OXCT1P55809 520 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 BEX3Q00994 111 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 ANKRD13AQ8IZ07 590 aa4.68□□□□□ -1.66
VPS13C-201ENST00000249837 CCDC185Q8N715 623 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms