RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CXorf57Q6NSI4 855 aaKnown RBP13.23□□□□□ -0.29
LSM8-201ENST00000249299 CFAP52Q8N1V2 620 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.23□□□□□ -0.29
LSM8-201ENST00000249299 FAM71DQ8N9W8 422 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 CASKIN2Q8WXE0 1202 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 ACDQ96AP0 544 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 SPATA13Q96N96 652 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 MYADMQ96S97 322 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 IL12RB2Q99665 862 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 RHOXF2Q9BQY4 288 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 APOL5Q9BWW9 433 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 FRMD8Q9BZ67 464 aaPredicted RBP13.23□□□□□ -0.29
LSM8-201ENST00000249299 FOXP3Q9BZS1 431 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 FBXO10Q9UK96 956 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 FAM50BQ9Y247 325 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 DFFAO00273 331 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CHADO15335 359 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CACNG3O60359 315 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 TSPAN3O60637 253 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 PRAMEF11O60813 436 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CCNB1P14635 433 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 PSMC3P17980 439 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 IVDP26440 423 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
LSM8-201ENST00000249299 FDFT1P37268 417 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 ADCY8P40145 1251 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 EIF2DP41214 584 aaKnown RBP13.22□□□□□ -0.29
LSM8-201ENST00000249299 MAGEA6P43360 314 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 GUCY2DQ02846 1103 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CBLBQ13191 982 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 BRD3Q15059 726 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 DHCR24Q15392 516 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
LSM8-201ENST00000249299 INO80DQ53TQ3 878 aaPredicted RBP13.22□□□□□ -0.29
LSM8-201ENST00000249299 ITPRIPL1Q6GPH6 555 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 RHBDF2Q6PJF5 856 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 EP400NLQ6ZTU2 488 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CEP128Q6ZU80 1094 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 MFN1Q8IWA4 741 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 BBS5Q8N3I7 341 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 TEX26Q8N6G2 289 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 DCAF4L2Q8NA75 395 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 HLA-CQ95604 372 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 HMCESQ96FZ2 354 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 SNF8Q96H20 258 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
LSM8-201ENST00000249299 LRRC3BQ96PB8 259 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 FAM118BQ9BPY3 351 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 C2orf49Q9BVC5 232 aaPredicted RBP13.22□□□□□ -0.29
LSM8-201ENST00000249299 BBS2Q9BXC9 721 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 PHACTR1Q9C0D0 580 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 EPB41L5Q9HCM4 733 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 OR51B4Q9Y5P0 310 aa13.22□□□□□ -0.29
LSM8-201ENST00000249299 CCDC151A5D8V7 595 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 ERI2A8K979 691 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 RNF103O00237 685 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 MBTPS2O43462 519 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 SEC31AO94979 1220 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 PEX11BO96011 259 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 IFNB1P01574 187 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 FOSL2P15408 326 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 VAV1P15498 845 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 CES1P23141 567 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 RPL22P35268 128 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 HSPA9P38646 679 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 VIPR2P41587 438 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 MLLT3P42568 568 aaPredicted RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 SGSHP51688 502 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 SULT2A1Q06520 285 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 WASHC5Q12768 1159 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 CALCOCO2Q13137 446 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 MORF4L2Q15014 288 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 E2F5Q15329 346 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 PARP6Q2NL67 630 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 LEXMQ3ZCV2 418 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 MAP9Q49MG5 647 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 ANKRD20A2Q5SQ80 823 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 LY6G5CQ5SRR4 150 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 ANKRD20A1Q5TYW2 823 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 ANKRD20A3Q5VUR7 823 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 TANGO2Q6ICL3 276 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 VITQ6UXI7 678 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 CCNI2Q6ZMN8 369 aaPredicted RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 KIAA0907Q7Z7F0 614 aaPredicted RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 CIR1Q86X95 450 aaPredicted RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 KLHDC8BQ8IXV7 354 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 YAF2Q8IY57 180 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 CARNMT1Q8N4J0 409 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 CPA6Q8N4T0 437 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 DEFB123Q8N688 67 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 MYLIPQ8WY64 445 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 RSPRY1Q96DX4 576 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 LMLNQ96KR4 655 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms