RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 KLHL5Q96PQ7 755 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 RBM22Q9NW64 420 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■■■■□ 23.1
NUP85-201ENST00000245544 SMPD4Q9NXE4 827 aa13.7□□□□□ -0.22
NUP85-201ENST00000245544 DOCK6Q96HP0 2047 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 ACSL4O60488 711 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 STC2O76061 302 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 OAS1P00973 400 aaKnown RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 IRF1P10914 325 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 SYN1P17600 705 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 ACVRL1P37023 503 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 SGSHP51688 502 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 CERCAMQ5T4B2 595 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 STEAP4Q687X5 459 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 OR52K2Q8NGK3 314 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 CENPTQ96BT3 561 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 CDK5RAP1Q96SZ6 601 aaKnown RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 PPCSQ9HAB8 311 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 ALG13Q9NP73 1137 aaKnown RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 CASS4Q9NQ75 786 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 MOCS1Q9NZB8 636 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 FNIP2Q9P278 1114 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 ACTL7BQ9Y614 415 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 GOLGA8RI6L899 631 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 NRG2O14511 850 aaPredicted RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 ZNF189O75820 626 aaPredicted RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 CTSAP10619 480 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 KRT4P19013 534 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 OR1E1P30953 314 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 KPNA1P52294 538 aaPredicted RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 NDST2P52849 883 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 RPS24P62847 133 aaKnown RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 ZXDBP98169 803 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 PPIGQ13427 754 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■□□ 18
NUP85-201ENST00000245544 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 KLHDC10Q6PID8 442 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 FCRL3Q96P31 734 aaPredicted RBP13.69□□□□□ -0.22
NUP85-201ENST00000245544 CCT8L2Q96SF2 557 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 GLOD4Q9HC38 313 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 PRKAG2Q9UGJ0 569 aa13.69□□□□□ -0.22
NUP85-201ENST00000245544 TTC24A2A3L6 582 aaPredicted RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 GMNCA6NCL1 334 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 FAM159BA6NKW6 160 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 F5H5T6 163 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 CXCL14O95715 111 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 INHBAP08476 426 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 HARS2P49590 506 aaKnown RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 EPHB3P54753 998 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 ERVFC1P60507 584 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 SLC10A7Q0GE19 358 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 NR1H3Q13133 447 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 CRYMQ14894 314 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 QPCTQ16769 361 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 TMC7Q7Z402 723 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 LRRC6Q86X45 466 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 ZNF354CQ86Y25 554 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 C7orf61Q8IZ16 206 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 GDAP1Q8TB36 358 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 PABPC5Q96DU9 382 aaKnown RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 SERAC1Q96JX3 654 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 PRICKLE1Q96MT3 831 aaPredicted RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 KLF16Q9BXK1 252 aaPredicted RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 IL21Q9HBE4 155 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 INSL6Q9Y581 213 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 ZFP37Q9Y6Q3 630 aaPredicted RBP13.68□□□□□ -0.22
NUP85-201ENST00000245544 OBSL1O75147 1896 aa13.68□□□□□ -0.22
NUP85-201ENST00000245544 CEP290O15078 2479 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 RAMP2O60895 175 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 F11P03951 625 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 PGAM1P18669 254 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 RPA3P35244 121 aaPredicted RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 MAXP61244 160 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 IHHQ14623 411 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 POLD3Q15054 466 aaPredicted RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 KDELC2Q7Z4H8 507 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 SLC26A11Q86WA9 606 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 KLHDC8BQ8IXV7 354 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 IPMKQ8NFU5 416 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 FCRL5Q96RD9 977 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 MCOLN1Q9GZU1 580 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.67□□□□□ -0.22
NUP85-201ENST00000245544 ACTL7AQ9Y615 435 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 ERI2A8K979 691 aaKnown RBP13.67□□□□□ -0.22
NUP85-201ENST00000245544 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 NDUFAB1O14561 156 aa13.67□□□□□ -0.22
NUP85-201ENST00000245544 ATP9BO43861 1147 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms