RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ADAM33Q9BZ11 813 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.46□□□□□ -1.226e-7■■■□□ 17.7
SSR1-201ENST00000244763 RABGEF1Q9UJ41 708 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 KIF1AQ12756 1690 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 WARSP23381 471 aaKnown RBP7.46□□□□□ -1.22
SSR1-201ENST00000244763 TRAF2Q12933 501 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 HDDC2Q7Z4H3 204 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 FAM20CQ8IXL6 584 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 FAM126BQ8IXS8 530 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 CPA6Q8N4T0 437 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 ULBP1Q9BZM6 244 aa7.46□□□□□ -1.22
SSR1-201ENST00000244763 KIAA1522Q9P206 1035 aaPredicted RBP7.46□□□□□ -1.22
SSR1-201ENST00000244763 SUCOQ9UBS9 1254 aaKnown RBP7.46□□□□□ -1.22
SSR1-201ENST00000244763 ADM5C9JUS6 153 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 DNTTP04053 509 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TSHRP16473 764 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 S100A3P33764 101 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 SARSP49591 514 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 NDUFV1P49821 464 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 VAC14Q08AM6 782 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 STXBP5Q5T5C0 1151 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 CXCL17Q6UXB2 119 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 MFSD7Q6UXD7 560 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 R3HCC1LQ7Z5L2 792 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ZNF786Q8N393 782 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ZSCAN18Q8TBC5 510 aaPredicted RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 APOL2Q9BQE5 337 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 MRPS33Q9Y291 106 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 BCL9O00512 1426 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 LAG3P18627 525 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ATP6V1B2P21281 511 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 EPS8Q12929 822 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TXNDC11Q6PKC3 985 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 PEG10Q86TG7 708 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 SPATA20Q8TB22 786 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TRPC4APQ8TEL6 797 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TATDN2Q93075 761 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 PTCH2Q9Y6C5 1203 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TCRBV5S4A2TA0A5A2 114 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 BCLAF3A2AJT9 711 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 SLC28A1O00337 649 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 MAP3K6O95382 1288 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ACSM2AQ08AH3 577 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 FRG1Q14331 258 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 TAF13Q15543 124 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ACSM2BQ68CK6 577 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 COMMD2Q86X83 199 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 DENND6AQ8IWF6 608 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 SORCS3Q9UPU3 1222 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 KIDINS220Q9ULH0 1771 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 CHADO15335 359 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 KIF1CO43896 1103 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 CXCL14O95715 111 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 AMPD1P23109 780 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TIMM50Q3ZCQ8 353 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 VSTM1Q6UX27 236 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 KIAA1324Q6UXG2 1013 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 GPR142Q7Z601 462 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TTC7BQ86TV6 843 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 FBXO22Q8NEZ5 403 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 PDGFDQ9GZP0 370 aaPredicted RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 VAV3Q9UKW4 847 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 CLCN5P51795 746 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TMPRSS6Q8IU80 811 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 EPHX4Q8IUS5 362 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 SYT12Q8IV01 421 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 KATNAL2Q8IYT4 538 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 SLAIN1Q8ND83 568 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TMBIM4Q9HC24 238 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 CNGB3Q9NQW8 809 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 MORF4L1Q9UBU8 362 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 GGT7Q9UJ14 662 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 INVSQ9Y283 1065 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TBC1D30Q9Y2I9 924 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 V9GYQ6 96 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 A0A096LPK6 155 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 BTN3A1O00481 513 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 KCNH1O95259 989 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ATG7O95352 703 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 RPA3P35244 121 aaPredicted RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 AFTPHQ6ULP2 937 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 KCNT2Q6UVM3 1135 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ADHFE1Q8IWW8 467 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 SPPL2BQ8TCT7 592 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 GPATCH2LQ9NWQ4 482 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 OR10H2O60403 315 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ITGA2P17301 1181 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 MLH1P40692 756 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 FASTKQ14296 549 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 APOBEC3HQ6NTF7 200 aaKnown RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 LPCAT2Q7L5N7 544 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ZNF571Q7Z3V5 609 aaPredicted RBP7.45□□□□□ -1.22
SSR1-201ENST00000244763 ATG4AQ8WYN0 398 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 ZNF711Q9Y462 761 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 CYP3A7-CYP3A51PA0A087WV96 503 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 SMIM35A0A1B0GVV1 85 aa7.45□□□□□ -1.22
SSR1-201ENST00000244763 AVILO75366 819 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms