RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 ALOX15P16050 662 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PTGER2P43116 358 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 GTF2A2P52657 109 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 EMP3P54852 163 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 INSCQ1MX18 579 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF423Q2M1K9 1284 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 CEP78Q5JTW2 689 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 FASTKD5Q7L8L6 764 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TMEM126BQ8IUX1 230 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SIX6OS1Q8N1H7 587 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NSUN6Q8TEA1 469 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 GPRASP2Q96D09 838 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 CDHR1Q96JP9 859 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 STMN3Q9NZ72 180 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MOCS1Q9NZB8 636 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MID2Q9UJV3 735 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SCAF8Q9UPN6 1271 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SYNJ2BP-COX16A0A087WUM0 186 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 OGTO15294 1046 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RGS5O15539 181 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 VAPBO95292 243 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 C1QAP02745 245 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PGAM1P18669 254 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NAGLUP54802 743 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 DGKZQ13574 1117 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SLC9A5Q14940 896 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MGAT5BQ3V5L5 792 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MTX3Q5HYI7 312 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NETO2Q8NC67 525 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 GRIN3AQ8TCU5 1115 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NCLNQ969V3 563 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PBXIP1Q96AQ6 731 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TMEM176AQ96HP8 235 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 COX4I2Q96KJ9 171 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SNRNP25Q9BV90 132 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PCDHAC1Q9H158 963 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MRPL40Q9NQ50 206 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 GTSE1Q9NYZ3 720 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 COX16Q9P0S2 106 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SLC39A10Q9ULF5 831 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 STYXL1Q9Y6J8 313 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 A0A087WXM4 84 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MAFGO15525 162 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 ARL4AP40617 200 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 DEFA1P59665 94 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 DEFA3P59666 94 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 EML3Q32P44 896 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PIGGQ5H8A4 983 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SLC9A4Q6AI14 798 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NCCRP1Q6ZVX7 275 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 ZCCHC7Q8N3Z6 543 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RYBPQ8N488 228 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RNF149Q8NC42 400 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 VPS50Q96JG6 964 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NRBP2Q9NSY0 501 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 FAM49BQ9NUQ9 324 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 ATAD3AQ9NVI7 634 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TBCCD1Q9NVR7 557 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 COL24A1Q17RW2 1714 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CCDC78A2IDD5 438 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SPDYE2BA6NHP3 402 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SAC3D1A6NKF1 404 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SPDYE6P0CI01 402 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TPSB2P20231 275 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 FUT4P22083 530 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ARRB2P32121 409 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ASPAP45381 313 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 APOFQ13790 326 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TPSAB1Q15661 275 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CA9Q16790 459 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SPDYE2Q495Y8 402 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 GLRA4Q5JXX5 417 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PID1Q7Z2X4 250 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 VSIG10LQ86VR7 867 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 HTR3CQ8WXA8 447 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 GATA5Q9BWX5 397 aaPredicted RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 RPF1Q9H9Y2 349 aaKnown RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SEPT3Q9UH03 358 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PADI4Q9UM07 663 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CARD8Q9Y2G2 431 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 WNK3Q9BYP7 1800 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PSMD12O00232 456 aaPredicted RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TRIM38O00635 465 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PLA2G6O60733 806 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 BCAS2O75934 225 aaPredicted RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 CCDC130P13994 396 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 TFEBP19484 476 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 GRIA4P48058 902 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 DLG2Q15700 870 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 GRTP1Q5TC63 336 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 FAM183BPQ6ZVS7 135 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PLD6Q8N2A8 252 aaKnown RBP9.41□□□□□ -0.9
SRSF6-201ENST00000244020 PQLC3Q8N755 202 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms