RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PNMA8CA0A1B0GUJ8 204 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 ZNF208O43345 1280 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 STX11O75558 287 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 OR5F1O95221 314 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 CASP9P55211 416 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 MBTD1Q05BQ5 628 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 CCDC153Q494R4 210 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 SLC45A4Q5BKX6 768 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 ZNF484Q5JVG2 852 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 C2orf73Q8N5S3 287 aaPredicted RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 DDX18Q9NVP1 670 aaKnown RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 OTOFQ9HC10 1997 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 F9P00740 461 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 ICAM1P05362 532 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 FCGR1AP12314 374 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 FOXO4P98177 505 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 PPIL2Q13356 520 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 DENND1CQ8IV53 801 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 ITFG1Q8TB96 612 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 NSMCE2Q96MF7 247 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 UXTQ9UBK9 157 aaPredicted RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 A0A1W2PRG6 482 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 H7C0S8 307 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 RNASE12Q5GAN4 147 aaKnown RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 MRPL17Q9NRX2 175 aaKnown RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 ZNF214Q9UL59 606 aaPredicted RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 CACNA2D1P54289 1103 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 GRIK4Q16099 956 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 RFX4Q33E94 735 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 ARMC12Q5T9G4 340 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 SERPINA13PQ6UXR4 307 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 MAGEB18Q96M61 343 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 SPATA9Q9BWV2 254 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 GULP1Q9UBP9 304 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 SMAPO00193 183 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 PDHXO00330 501 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 CYP2C8P10632 490 aa13.4□□□□□ -0.26
NEK9-201ENST00000238616 WBP11Q9Y2W2 641 aaKnown RBP13.4□□□□□ -0.26
NEK9-201ENST00000238616 IGKV5-2P06315 115 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 DBIP07108 87 aaKnown RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 MGAT1P26572 445 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 ZNF470Q6ECI4 717 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 MKNK1Q9BUB5 465 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 ACOT9Q9Y305 439 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 SGTAO43765 313 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 REEP1Q9H902 201 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 ATXN2Q99700 1313 aaKnown RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 SH3D21A4FU49 640 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 FOXN3O00409 490 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 AVILO75366 819 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 S100A9P06702 114 aaKnown RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 CCNYL3P0C7X3 344 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 CPA3P15088 417 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 ZDHHC13Q8IUH4 622 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 MAGEE2Q8TD90 523 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 TBL1YQ9BQ87 522 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 ROPN1BQ9BZX4 212 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 ROPN1Q9HAT0 212 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 EHD3Q9NZN3 535 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 NR2F1P10589 423 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 RGS1Q08116 209 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 CRY1Q16526 586 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 NUAK2Q9H093 628 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 SPAG17Q6Q759 2223 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 H3BRB1 525 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 TRAP1Q12931 704 aaKnown RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 COPG2Q9UBF2 871 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 PCDHA11Q9Y5I1 949 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 PAGE2BQ5JRK9 111 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 C18orf25Q96B23 403 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 EPB41L1Q9H4G0 881 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 FFAR3O14843 346 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 GPR42O15529 346 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 BST2Q10589 180 aaKnown RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 PACS2Q86VP3 889 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 MCEMP1Q8IX19 187 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 MROH8Q9H579 483 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 HMX1Q9NP08 348 aaPredicted RBP13.39□□□□□ -0.27
NEK9-201ENST00000238616 ANKEF1Q9NU02 776 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
NEK9-201ENST00000238616 TLL1O43897 1013 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 VDRP11473 427 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 PTPN5P54829 565 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 MYL6P60660 151 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 IKBKEQ14164 716 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 NKD1Q969G9 470 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 MCRS1Q96EZ8 462 aa13.38□□□□□ -0.27
NEK9-201ENST00000238616 HMG20AQ9NP66 347 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms