RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 SERPINB12Q96P63 405 aa8.88□□□□□ -0.99
VPS4B-201ENST00000238497 ULBP1Q9BZM6 244 aa8.88□□□□□ -0.99
VPS4B-201ENST00000238497 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
VPS4B-201ENST00000238497 NACA2Q9H009 215 aa8.88□□□□□ -0.99
VPS4B-201ENST00000238497 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
VPS4B-201ENST00000238497 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
VPS4B-201ENST00000238497 APOC4-APOC2K7ER74 178 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 CPP00450 1065 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 APOC2P02655 101 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 AOC1P19801 751 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PHBP35232 272 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 RPA3P35244 121 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 CLCN5P51795 746 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 NHLH1Q02575 133 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 BST2Q10589 180 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 STAT4Q14765 748 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 MAPRE1Q15691 268 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 SPRED3Q2MJR0 410 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 BOLA3Q53S33 107 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ANKRD20A8PQ5CZ79 823 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ERMARDQ5T6L9 678 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 MROH9Q5TGP6 573 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ZNF449Q6P9G9 518 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 IGDCC3Q8IVU1 814 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PLD5Q8N7P1 536 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 DNAAF3Q8N9W5 541 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PRSS33Q8NF86 280 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 C2orf15Q8WU43 125 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 KBTBD7Q8WVZ9 684 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 TLCD1Q96CP7 247 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PCED1BQ96HM7 432 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PCDH9Q9HC56 1237 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PCDH18Q9HCL0 1135 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 CRTAC1Q9NQ79 661 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 SPATA6Q9NWH7 488 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PIAS3Q9Y6X2 628 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ATG2BQ96BY7 2078 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ATP9BO43861 1147 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 MOSPD3O75425 235 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ECI2O75521 394 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 MMP13P45452 471 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 SOX9P48436 509 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 BCAT1P54687 386 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 HDAC4P56524 1084 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 OASLQ15646 514 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 KBTBD12Q3ZCT8 623 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 RHBDF2Q6PJF5 856 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 LVRNQ6Q4G3 990 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 POTEHQ6S545 545 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 VSIG1Q86XK7 387 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 UNC5BQ8IZJ1 945 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 LRRC8CQ8TDW0 803 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 CYP2S1Q96SQ9 504 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PAFAH2Q99487 392 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 TASP1Q9H6P5 420 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 HAUS2Q9NVX0 235 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ZC3H7BQ9UGR2 993 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 BAIAP2L1Q9UHR4 511 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 GOLGA8TH3BQL2 631 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PRAMEF12O95522 483 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 SNX16P57768 344 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 IL9RQ01113 521 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ZBTB16Q05516 673 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 MORF4L2Q15014 288 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 RNASEH2BQ5TBB1 312 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 LRRC38Q5VT99 294 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 CWF19L1Q69YN2 538 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 VITQ6UXI7 678 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 TMC8Q8IU68 726 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PDCD7Q8N8D1 485 aaKnown RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ATP11CQ8NB49 1132 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PPP1R14CQ8TAE6 165 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 CCHCR1Q8TD31 782 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 PRCCQ92733 491 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ELSPBP1Q96BH3 223 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 ABCF3Q9NUQ8 709 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 GTSE1Q9NYZ3 720 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 KLHL8Q9P2G9 620 aaPredicted RBP8.87□□□□□ -0.99
VPS4B-201ENST00000238497 SLC17A6Q9P2U8 582 aa8.87□□□□□ -0.99
VPS4B-201ENST00000238497 A0A0G2JND7 137 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 TCRBV5S1A1TA0A578 114 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 GABBR2O75899 941 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 HMBSP08397 361 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 FAM200BP0CF97 657 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 DRD4P21917 467 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 MAGEA9P43362 315 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 COPS2P61201 443 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 YWHAZP63104 245 aaKnown RBP8.86□□□□□ -0.99
VPS4B-201ENST00000238497 TNK2Q07912 1038 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 OLFML1Q6UWY5 402 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 ZNF852Q6ZMS4 543 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 CROCCP2Q86T23 111 aa8.86□□□□□ -0.99
VPS4B-201ENST00000238497 ARL14EPQ8N8R7 260 aaPredicted RBP8.86□□□□□ -0.99
VPS4B-201ENST00000238497 ANKRD52Q8NB46 1076 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms