RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 SULT2A1Q06520 285 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 CAMK2GQ13555 558 aaPredicted RBP14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 POLD3Q15054 466 aaPredicted RBP14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 C9orf64Q5T6V5 341 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 RASSF3Q86WH2 238 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 NPWQ8N729 165 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 FRMD1Q8N878 549 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 DCAF4L2Q8NA75 395 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZBTB44Q8NCP5 570 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 FRS2Q8WU20 508 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 HMCESQ96FZ2 354 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 SLC39A8Q9C0K1 460 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 MKRN2Q9H000 416 aaKnown RBP14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 MAGEH1Q9H213 219 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 LRRC19Q9H756 370 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZSCAN32Q9NX65 697 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 EBF1Q9UH73 591 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 CHD5Q8TDI0 1954 aa14.74□□□□□ -0.05
SUPT4H1-201ENST00000225504 AXIN1O15169 862 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 ARHGAP6O43182 974 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 SYNCRIPO60506 623 aaKnown RBP14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 SIN3BO75182 1162 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 SRCP12931 536 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 NDUFV2P19404 249 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 KDELR1P24390 212 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 ARL4AP40617 200 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 COPAP53621 1224 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 DPYSL3Q14195 570 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 KRT81Q14533 505 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 DLG2Q15700 870 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 HNRNPA1L2Q32P51 320 aaKnown RBP14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 ACCSLQ4AC99 568 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 AFMIDQ63HM1 303 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 WDR5BQ86VZ2 330 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 LONP2Q86WA8 852 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 ARHGAP12Q8IWW6 846 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 PGBD3Q8N328 593 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 SH2D3CQ8N5H7 860 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 RLN3Q8WXF3 142 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 PTPRN2Q92932 1015 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 MRGPRX1Q96LB2 322 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZNF830Q96NB3 372 aaPredicted RBP14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 C2orf49Q9BVC5 232 aaPredicted RBP14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 CALN1Q9BXU9 219 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 CD93Q9NPY3 652 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 SUN2Q9UH99 717 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 EML5Q05BV3 1969 aa14.73□□□□□ -0.05
SUPT4H1-201ENST00000225504 CKAP5Q14008 2032 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 C3orf70A6NLC5 250 aaPredicted RBP14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 DCLK1O15075 740 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 KDELR3O43731 214 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 SPOPO43791 374 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 ATP9BO43861 1147 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 LILRB5O75023 590 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 KRT7P08729 469 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 SLC1A1P43005 524 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 NRLP54845 237 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 NAP1L1P55209 391 aaKnown RBP14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 YBEYP58557 167 aaPredicted RBP14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 SERINC3Q13530 473 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 STARD3Q14849 445 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 DAAM2Q86T65 1068 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 TMPRSS6Q8IU80 811 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 KDM1BQ8NB78 822 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 CCDC112Q8NEF3 446 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 PCDH19Q8TAB3 1148 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 PDLIM2Q96JY6 352 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 FAM129BQ96TA1 746 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 FAM126AQ9BYI3 521 aaPredicted RBP14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 SLC25A13Q9UJS0 675 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 HS3ST2Q9Y278 367 aa14.72□□□□□ -0.05
SUPT4H1-201ENST00000225504 MACROD2A1Z1Q3 448 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 GRID2IPA4D2P6 1211 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 J3KR12 359 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZNF821O75541 412 aaPredicted RBP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ALDH1A2O94788 518 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 MARCKSL1P49006 195 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 VASPP50552 380 aaPredicted RBP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 PAPOLAP51003 745 aaKnown RBP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZNF135P52742 658 aaPredicted RBP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 NDST2P52849 883 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 NHLH1Q02575 133 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 KIF5AQ12840 1032 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 PDK2Q15119 407 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 E2F5Q15329 346 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ANKRD20A8PQ5CZ79 823 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 LRRC38Q5VT99 294 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 C11orf63Q6NUN7 778 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ARHGAP36Q6ZRI8 547 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ZNF354CQ86Y25 554 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 CACUL1Q86Y37 369 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 RHOT1Q8IXI2 618 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 STK40Q8N2I9 435 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 FAM160A2Q8N612 972 aaPredicted RBP14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 PQLC3Q8N755 202 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 LRRC57Q8N9N7 239 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 ATP11CQ8NB49 1132 aa14.71□□□□□ -0.05
SUPT4H1-201ENST00000225504 KRT35Q92764 455 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms