RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ARL13BQ3SXY8 428 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 NOMO2Q5JPE7 1267 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 GLB1LQ6UWU2 654 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 CCDC80Q76M96 950 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 CIR1Q86X95 450 aaPredicted RBP10.18□□□□□ -0.78
USP11-201ENST00000218348 GSDMBQ8TAX9 411 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 ARMCX1Q9P291 453 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 TXNDC16Q9P2K2 825 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 NUMBLQ9Y6R0 609 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 FAM237BA0A1B0GVD1 139 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 A0A1W2PQH9 124 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 HHLA1C9JL84 531 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 PRPF4O43172 522 aaKnown RBP eCLIP10.18□□□□□ -0.789e-6■□□□□ 10.5
USP11-201ENST00000218348 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
USP11-201ENST00000218348 PTPN3P26045 913 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 ITKQ08881 620 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 HSP90AA5PQ58FG0 334 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 TTC39BQ5VTQ0 682 aaPredicted RBP10.18□□□□□ -0.78
USP11-201ENST00000218348 CD300LGQ6UXG3 332 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 YTHDF3Q7Z739 585 aaKnown RBP10.18□□□□□ -0.78
USP11-201ENST00000218348 IPMKQ8NFU5 416 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 ATP2A3Q93084 1043 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 SPATA17Q96L03 361 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 TSSK1BQ9BXA7 367 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 DMAP1Q9NPF5 467 aaPredicted RBP10.18□□□□□ -0.78
USP11-201ENST00000218348 CNGB3Q9NQW8 809 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 BATF3Q9NR55 127 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 CHRAC1Q9NRG0 131 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 CHKBQ9Y259 395 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 ZNF510Q9Y2H8 683 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 SPO11Q9Y5K1 396 aa10.18□□□□□ -0.78
USP11-201ENST00000218348 SDR42E2A6NKP2 422 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TADA2AO75478 443 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 SUPT3HO75486 399 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 SERPINB4P48594 390 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 MAXP61244 160 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 NCALDP61601 193 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 RPL10AP62906 217 aaKnown RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 POU6F1Q14863 301 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 CHI3L2Q15782 390 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 FAM171A1Q5VUB5 890 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TTC7BQ86TV6 843 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 RASSF3Q86WH2 238 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TMEM86AQ8N2M4 240 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 SLC35B4Q969S0 331 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 PPP1R36Q96LQ0 422 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 FCRL3Q96P31 734 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 OLFM3Q96PB7 478 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 SLC2A13Q96QE2 648 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 LRRC37BQ96QE4 947 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 SEPT5Q99719 369 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 SENP1Q9P0U3 644 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 ZFATQ9P243 1243 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 VANGL2Q9ULK5 521 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 ACTL7BQ9Y614 415 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 HMX2A2RU54 273 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 ARHGAP42A6NI28 874 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 DCLK1O15075 740 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 LYPLA1O75608 230 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 RGS19P49795 217 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 USP46P62068 366 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TLE2Q04725 743 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 EFEMP1Q12805 493 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 DPYSQ14117 519 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 CLLU1OSQ5K130 101 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 C16orf59Q7L2K0 433 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 LIMS2Q7Z4I7 341 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 RNF168Q8IYW5 571 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 ABI1Q8IZP0 508 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TNS4Q8IZW8 715 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 THEM5Q8N1Q8 247 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 GIPC2Q8TF65 315 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 CEP295NLQ96MC4 621 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 FERMT1Q9BQL6 677 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 EYSQ5T1H1 3165 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TPP1O14773 563 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 DNAJC6O75061 913 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 PAGE1O75459 146 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 ZWINTO95229 277 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 OAS1P00973 400 aaKnown RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 RPLP2P05387 115 aaKnown RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 KRT16P08779 473 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 RPL17P18621 184 aaKnown RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 AVPR1AP37288 418 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 CCL23P55773 120 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TAF1BQ53T94 588 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 BHLHA9Q7RTU4 235 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TMCO2Q7Z6W1 182 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 SPATA6LQ8N4H0 392 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 KCTD13Q8WZ19 329 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 RTP4Q96DX8 246 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 SCLYQ96I15 445 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 APOPT1Q96IL0 206 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 FCRL2Q96LA5 508 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 ACTR5Q9H9F9 607 aaPredicted RBP10.17□□□□□ -0.78
USP11-201ENST00000218348 CHST12Q9NRB3 414 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 OSER1Q9NX31 292 aa10.17□□□□□ -0.78
USP11-201ENST00000218348 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.16□□□□□ -0.78
USP11-201ENST00000218348 CCL22O00626 93 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms