RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Vmn2r27D3YUK6 857 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Gm8334F7CD45 553 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ifi206G3UZV2 921 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 BC024978J3QPC3 361 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Vmn2r67K7N6T2 851 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 ChkaO54804 453 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Grem1O70326 184 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ets2P15037 468 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ly6dP35459 127 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 GaltQ03249 379 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Zbtb14Q08376 449 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Kcnc2Q14B80 642 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Serac1Q3U213 654 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Fbxo39Q5NBU5 443 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Grm6Q5NCH9 871 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Pabpn1lQ5XFR0 273 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Msi1Q61474 362 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Akap7Q7TN79 314 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Olfr1198Q7TR12 308 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ankzf1Q80UU1 748 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Il17reQ8BH06 637 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Thnsl1Q8BH55 747 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Gjc2Q8BQU6 440 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Cpsf7Q8BTV2 471 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Nlrp4bQ8C6J9 863 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Rfx6Q8C7R7 927 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Scara3Q8C850 606 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Atg14Q8CDJ3 492 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Armcx6Q8K3A6 301 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Gspt1Q8R050 636 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ugt2b1Q8R084 529 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Abhd8Q8R0P8 439 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 OlahQ8R197 265 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 AmotQ8VHG2 1126 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Hes6Q9JHE6 224 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 PygmQ9WUB3 842 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Itpripl1A2ASA8 547 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Ism1A2ATD1 454 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 MipepA6H611 711 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Zscan5bB2RTN3 468 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Spin2fJ3QPU0 254 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Olfr1022L7MTT3 315 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Rgs2O08849 211 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Kifc3O35231 824 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Slc27a2O35488 620 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Il3P01586 166 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Cd2P08920 344 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Htr2cP34968 459 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Flt3lgP49772 232 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 MipP51180 263 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Arpp19P56212 112 aaKnown RBP7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Usp46P62069 366 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 InhbaQ04998 424 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Serpina6Q06770 397 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 PrlrQ08501 608 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Lsmem1Q3UQS2 128 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Ccdc160Q3UYG1 323 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Garnl3Q3V0G7 1038 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Gstt2Q61133 244 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Grid1Q61627 1009 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Dmc1Q61880 340 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Ripor1Q68FE6 1223 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Orai3Q6P8G8 290 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Heatr3Q8BQM4 679 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Zmym6Q8BS54 1249 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 BoraQ8BS90 525 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Prr33Q8C494 260 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 HpdlQ8K248 371 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Vps37bQ8R0J7 285 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Lrrc8cQ8R502 803 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Nt5c1bQ91YE9 573 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Dnajc3Q91YW3 504 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Atpaf2Q91YY4 289 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Ndufa10Q99LC3 355 aaKnown RBP7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Sike1Q9CPR7 207 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Mrps22Q9CXW2 359 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 QpctQ9CYK2 362 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Spaca7Q9D2S4 182 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Mrps9Q9D7N3 390 aaKnown RBP7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Subh2bvQ9D9Z7 123 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Rsrc1Q9DBU6 334 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Mzf1S4R1L6 814 aa7.71□□□□□ -1.18
Trim40-201ENSMUST00000087158 Klhdc7bA0A286YD60 1263 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Rhox3cA2AWM0 215 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Gm5483B2RV77 97 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Fam47eD3YWC7 402 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Maml3D4QGC2 1135 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Cntnap3E9PY62 1287 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Akain1G3UWD5 69 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Rhox3hL7MU37 215 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Gfra2O08842 464 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Pbx3O35317 434 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Hes2O54792 157 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Icam1P13597 537 aaKnown RBP7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Rps6ka3P18654 740 aaKnown RBP7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Cd72P21855 354 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 PenkP22005 268 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Wnt3aP27467 352 aa7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 DesP31001 469 aaKnown RBP7.7□□□□□ -1.18
Trim40-201ENSMUST00000087158 Dpf3P58269 378 aa7.7□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms