RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 HEY1Q9Y5J3 304 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 OR51B4Q9Y5P0 310 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 MIA3Q5JRA6 1907 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 A0A0D9SEW6 157 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 TCRBV7S2A1N4TA0A589 114 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PGRMC1O00264 195 aaKnown RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 KDELR3O43731 214 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 MFSD11O43934 449 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PABPC1P11940 636 aaKnown RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 CCNCP24863 283 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 MZF1P28698 734 aaPredicted RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 CTHP32929 405 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 CD70P32970 193 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 CSKP41240 450 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PAPOLAP51003 745 aaKnown RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 OTUD4Q01804 1114 aaKnown RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 GBE1Q04446 702 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 SULT2A1Q06520 285 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 ZNF33AQ06730 810 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 GALNT2Q10471 571 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 SERINC3Q13530 473 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PDK1Q15118 436 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 NOMO1Q15155 1222 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 CCNG2Q16589 344 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PLEKHG6Q3KR16 790 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 TP53INP2Q8IXH6 220 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 AHI1Q8N157 1196 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PHTF2Q8N3S3 785 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 ACTL9Q8TC94 416 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 TTC17Q96AE7 1141 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 ACDQ96AP0 544 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 OLFM3Q96PB7 478 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 TSGA13Q96PP4 275 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 MUC3BQ9H195 1237 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 INTS6Q9UL03 887 aaKnown RBP12.61□□□□□ -0.39
LINC00339-213ENST00000642137 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 PIAS3Q9Y6X2 628 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 COL4A2P08572 1712 aa12.61□□□□□ -0.39
LINC00339-213ENST00000642137 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 DFFAO00273 331 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 MAN2B1O00754 1011 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 PPP1R12AO14974 1030 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 TRIM24O15164 1050 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 APODP05090 189 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 PECAM1P16284 738 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 ACVRL1P37023 503 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 GARSP41250 739 aaKnown RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 GRIA2P42262 883 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 SOX9P48436 509 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 PRKCQQ04759 706 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 IL10RBQ08334 325 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 SLC20A2Q08357 652 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 PITRM1Q5JRX3 1037 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 DNTTIP2Q5QJE6 756 aaKnown RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 IL31Q6EBC2 164 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 DRICH1Q6PGQ1 229 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 APCDD1Q8J025 514 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 FATE1Q969F0 183 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 CAPZA3Q96KX2 299 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 SPON2Q9BUD6 331 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 ATP13A1Q9HD20 1204 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 SAE1Q9UBE0 346 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 VPS28Q9UK41 221 aa12.6□□□□□ -0.39
LINC00339-213ENST00000642137 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
LINC00339-213ENST00000642137 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 ZSCAN5CA6NGD5 496 aaPredicted RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 KRIT1O00522 736 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 MAFKO60675 156 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 ZNF189O75820 626 aaPredicted RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 ZMPSTE24O75844 475 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 KAT7O95251 611 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 ATP5BP06576 529 aaKnown RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 POLR2EP19388 210 aaKnown RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 EIF3EP60228 445 aaKnown RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 PPIDQ08752 370 aaKnown RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 EIF4HQ15056 248 aaKnown RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 E2F5Q15329 346 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 MLF2Q15773 248 aaPredicted RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 TMEM196Q5HYL7 178 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 IER5LQ5T953 404 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 TMEM215Q68D42 235 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 MBLAC2Q68D91 279 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 TIGD7Q6NT04 549 aaPredicted RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 ADAT2Q7Z6V5 191 aaKnown RBP12.59□□□□□ -0.39
LINC00339-213ENST00000642137 ZNF354CQ86Y25 554 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 TERB1Q8NA31 727 aa12.59□□□□□ -0.39
LINC00339-213ENST00000642137 DCAF4L2Q8NA75 395 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms