RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 EXOC4Q96A65 974 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 AZIN2Q96A70 460 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 AGAP3Q96P47 875 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 PHACTR1Q9C0D0 580 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 ATXN3LQ9H3M9 355 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 TMBIM4Q9HC24 238 aa18■□□□□ 0.47
PHGDH-232ENST00000641947 ZFP37Q9Y6Q3 630 aaPredicted RBP18■□□□□ 0.47
PHGDH-232ENST00000641947 RASA4BC9J798 803 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 RASA4O43374 803 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 FDFT1P37268 417 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 NUMBP49757 651 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 NDST2P52849 883 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 GPX6P59796 221 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 OLIG2Q13516 323 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 BBS9Q3SYG4 887 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 HSP90B2PQ58FF3 399 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 ACBD5Q5T8D3 534 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 ELMOD1Q8N336 334 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 PDCD7Q8N8D1 485 aaKnown RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 SHKBP1Q8TBC3 707 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 EPS8L3Q8TE67 593 aaKnown RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 MRPS31Q92665 395 aaKnown RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 ASAH2Q9NR71 780 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 DNMT3BQ9UBC3 853 aaKnown RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 EPOPA6NHQ4 379 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 J3KR12 359 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 OPA1O60313 960 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 NFKB1P19838 968 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 MAGEA3P43357 314 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 EPHA5P54756 1037 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 GYS2P54840 703 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 IFI35P80217 286 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 CBLBQ13191 982 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 MTA1Q13330 715 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 SLC5A9Q2M3M2 681 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 PARP6Q2NL67 630 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 Q6ZNB5 142 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 CAPN12Q6ZSI9 719 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 RBM23Q86U06 439 aaKnown RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 MCUQ8NE86 351 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 FBXO36Q8NEA4 188 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 TEKT5Q96M29 485 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 IL12RB2Q99665 862 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 FERMT1Q9BQL6 677 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 MLPHQ9BV36 600 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 GBA3Q9H227 469 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 IPO11Q9UI26 975 aaKnown RBP17.99■□□□□ 0.47
PHGDH-232ENST00000641947 STOML2Q9UJZ1 356 aa17.99■□□□□ 0.47
PHGDH-232ENST00000641947 MATN3O15232 486 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 POLR3GO15318 223 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-232ENST00000641947 MTSS1O43312 755 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 TSPAN3O60637 253 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 LPXNO60711 386 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 CCNB1P14635 433 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 CDC25CP30307 473 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 ACVRL1P37023 503 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 ADGRF1Q5T601 910 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 ZNF697Q5TEC3 545 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 PDIK1LQ8N165 341 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 SH2D3CQ8N5H7 860 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 MAML1Q92585 1016 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 SAMD11Q96NU1 681 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 SLC46A2Q9BY10 475 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 SMG9Q9H0W8 520 aaKnown RBP17.98■□□□□ 0.47
PHGDH-232ENST00000641947 CHMP2BQ9UQN3 213 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 TEX264Q9Y6I9 313 aa17.98■□□□□ 0.47
PHGDH-232ENST00000641947 GFRA2O00451 464 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 EIF3HO15372 352 aaKnown RBP eCLIP17.97■□□□□ 0.47
PHGDH-232ENST00000641947 CKMP06732 381 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 OR1E1P30953 314 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 ELK3P41970 407 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 MAPKAPK2P49137 400 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 EIF3BP55884 814 aaKnown RBP17.97■□□□□ 0.47
PHGDH-232ENST00000641947 NTHL1P78549 312 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 SLC7A9P82251 487 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 IFFO1Q0D2I5 559 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 SPARCL1Q14515 664 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 KRT71Q3SY84 523 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 POTEHQ6S545 545 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 CEP128Q6ZU80 1094 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 OTOP3Q7RTS5 596 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 MPP5Q8N3R9 675 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 GDPD5Q8WTR4 605 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 GDF15Q99988 308 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 PLAC1Q9HBJ0 212 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 EIF2B3Q9NR50 452 aaKnown RBP17.97■□□□□ 0.47
PHGDH-232ENST00000641947 PIH1D1Q9NWS0 290 aaKnown RBP17.97■□□□□ 0.47
PHGDH-232ENST00000641947 RSPH14Q9UHP6 348 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 HCFC2Q9Y5Z7 792 aa17.97■□□□□ 0.47
PHGDH-232ENST00000641947 NUP210Q8TEM1 1887 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-232ENST00000641947 A0A0D9SEW6 157 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 E7EVH7 732 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 RAMP2O60895 175 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 HLA-DQB2P05538 268 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 ABHD2P08910 425 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 SSTR1P30872 391 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms