RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
SAMMSON-221ENST00000641715 VPS28Q9UK41 221 aa12.11□□□□□ -0.47
SAMMSON-221ENST00000641715 NYNRINQ9P2P1 1898 aaKnown RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 A0A0D9SEW6 157 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 C4orf47A7E2U8 309 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 CFIP05156 583 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 SERPINF2P08697 491 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 RRM1P23921 792 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 NNMTP40261 264 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 PBX1P40424 430 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 HDAC4P56524 1084 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 RPL7AP62424 266 aaKnown RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 TPM4P67936 248 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 FOXK2Q01167 660 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 DUOXA1Q1HG43 343 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 SKOR2Q2VWA4 1001 aaPredicted RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 SFMBT2Q5VUG0 894 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 IL31Q6EBC2 164 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 DNAJC24Q6P3W2 148 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 STRADAQ7RTN6 431 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 SETD3Q86TU7 594 aaPredicted RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 RGL4Q8IZJ4 473 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 CEP76Q8TAP6 659 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 FRS2Q8WU20 508 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 FAM172AQ8WUF8 416 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 PSMB7Q99436 277 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 MUC3BQ9H195 1237 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 FSCN3Q9NQT6 498 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 PLSCR2Q9NRY7 297 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 ZNF212Q9UDV6 495 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 OR12D3Q9UGF7 316 aa12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 ASCC3Q8N3C0 2202 aaKnown RBP12.1□□□□□ -0.47
SAMMSON-221ENST00000641715 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 MEI4A8MW99 385 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 TMCO5BA8MYB1 307 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 FAM72CH0Y354 149 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 MID1O15344 667 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 RNASEH1O60930 286 aaKnown RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 MT-CO1P00395 513 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 RHOCP08134 193 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 ENGP17813 658 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 GPD1P21695 349 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 OR1E1P30953 314 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 PRKCIP41743 596 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 UBASH3AP57075 661 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 CST6Q15828 149 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 ASIC2Q16515 512 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 FIGNQ5HY92 759 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 WDR45BQ5MNZ6 344 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 FAM72AQ5TYM5 149 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 DCAF12L1Q5VU92 463 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 FAM72DQ6L9T8 149 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 FAM72BQ86X60 149 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 STK40Q8N2I9 435 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 CCDC185Q8N715 623 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 DNASE2BQ8WZ79 361 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 MCEEQ96PE7 176 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 EDEM3Q9BZQ6 932 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 PABPC3Q9H361 631 aaKnown RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 C6orf106Q9H6K1 298 aaPredicted RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 TMEM9BQ9NQ34 198 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 PPARGC1AQ9UBK2 798 aaKnown RBP12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 SERGEFQ9UGK8 458 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 SLC25A13Q9UJS0 675 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 SLC6A14Q9UN76 642 aa12.09□□□□□ -0.47
SAMMSON-221ENST00000641715 PCDH15Q96QU1 1955 aa12.08□□□□□ -0.47
SAMMSON-221ENST00000641715 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 CCP110O43303 1012 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 ATP9BO43861 1147 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 SNAP91O60641 907 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 SKILP12757 684 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 SLC8A1P32418 973 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 ZNF143P52747 638 aaPredicted RBP12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 NRG1Q02297 640 aaPredicted RBP12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 GFPT1Q06210 699 aaPredicted RBP12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 KLHL30Q0D2K2 578 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 ELAVL3Q14576 367 aaKnown RBP12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 DLG2Q15700 870 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 C6orf118Q5T5N4 469 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 MANEALQ5VSG8 457 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 USP30Q70CQ3 517 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 RABEPKQ7Z6M1 372 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 SH2D3CQ8N5H7 860 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 VCPIP1Q96JH7 1222 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 ZYG11BQ9C0D3 744 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 BTBD1Q9H0C5 482 aa12.08□□□□□ -0.48
SAMMSON-221ENST00000641715 OSBPL2Q9H1P3 480 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms