RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PCDH19Q8TAB3 1148 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 UHMK1Q8TAS1 419 aaKnown RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 BPIFB1Q8TDL5 484 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 CPT1BQ92523 772 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 P3H4Q92791 437 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 NT5C3BQ969T7 300 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 FAM149B1Q96BN6 582 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 PLD4Q96BZ4 506 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 MSANTD3Q96H12 275 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 PWWP2AQ96N64 755 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SERPINB11Q96P15 392 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SLC2A13Q96QE2 648 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 NACA2Q9H009 215 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 RAB6CQ9H0N0 254 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 KCNK12Q9HB15 430 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SAYSD1Q9NPB0 183 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SLC2A4RGQ9NR83 387 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 THG1LQ9NWX6 298 aaKnown RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 RCOR3Q9P2K3 495 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 SAE1Q9UBE0 346 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-224ENST00000641711 DUSP12Q9UNI6 340 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 ZNF510Q9Y2H8 683 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 NUMBLQ9Y6R0 609 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 COL4A2P08572 1712 aa10.55□□□□□ -0.72
PHGDH-224ENST00000641711 E2F8A0AVK6 867 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 C5orf60A6NFR6 353 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 YJEFN3A6XGL0 299 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 E7ENQ6 273 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 EBAG9O00559 213 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 PRAMEF12O95522 483 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 SRFP11831 508 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 L1CAMP32004 1257 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 MAGEA6P43360 314 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 SLCO1A2P46721 670 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 NR2C2P49116 596 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 MLLT6P55198 1093 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 ARL4CP56559 192 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 YWHAZP63104 245 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 RING1Q06587 406 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 NR1H3Q13133 447 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 PDGFRLQ15198 375 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 HIF1AQ16665 826 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 CA9Q16790 459 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 LONRF1Q17RB8 773 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 SLC25A52Q3SY17 297 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 ZC3H12AQ5D1E8 599 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 C10orf120Q5SQS8 335 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 SCYL2Q6P3W7 929 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 DARS2Q6PI48 645 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 C4orf22Q6V702 233 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 EXOC3L1Q86VI1 746 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 RNF135Q8IUD6 432 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 ARL14EPQ8N8R7 260 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 CLEC4CQ8WTT0 213 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 FGF14Q92915 247 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 IRF7Q92985 503 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 USP13Q92995 863 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 C9orf72Q96LT7 481 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 ZSWIM3Q96MP5 696 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 CCT8L2Q96SF2 557 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 FRMD8Q9BZ67 464 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 CCSER2Q9H7U1 834 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 DNAJC17Q9NVM6 304 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 PAK5Q9P286 719 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 TBC1D14Q9P2M4 693 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 LSM7Q9UK45 103 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 STAP1Q9ULZ2 295 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 CPQQ9Y646 472 aa10.54□□□□□ -0.72
PHGDH-224ENST00000641711 ATXN2Q99700 1313 aaKnown RBP10.54□□□□□ -0.72
PHGDH-224ENST00000641711 XIRP2A4UGR9 3374 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 SMIM23A6NLE4 172 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 CAPN9O14815 690 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 ALADP13716 330 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 GLULP15104 373 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 CHN1P15882 459 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 TFE3P19532 575 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-224ENST00000641711 SP100P23497 879 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-224ENST00000641711 NOS2P35228 1153 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 CCT5P48643 541 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 ACBD5Q5T8D3 534 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-224ENST00000641711 ANKRD22Q5VYY1 191 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 NUGGCQ68CJ6 796 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 TANGO2Q6ICL3 276 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 PARM1Q6UWI2 310 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 VITQ6UXI7 678 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 NPNTQ6UXI9 565 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 PPP1R21Q6ZMI0 780 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 CDKL3Q8IVW4 592 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-224ENST00000641711 YAF2Q8IY57 180 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 SLC44A3Q8N4M1 653 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 SH3RF2Q8TEC5 729 aa10.53□□□□□ -0.72
PHGDH-224ENST00000641711 ZNF473Q8WTR7 871 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms