RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 ZNF557Q8N988 423 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-215ENST00000639145 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
SCARB2-215ENST00000639145 SEC16BQ96JE7 1060 aa13.87□□□□□ -0.19
SCARB2-215ENST00000639145 LHX5Q9H2C1 402 aa13.87□□□□□ -0.19
SCARB2-215ENST00000639145 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCARB2-215ENST00000639145 V9GYQ6 96 aa13.87□□□□□ -0.19
SCARB2-215ENST00000639145 FKBP9O95302 570 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 EOMESO95936 686 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ALOX15P16050 662 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 WASP42768 502 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 KCNK10P57789 538 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 HSPA14Q0VDF9 509 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ITGA9Q13797 1035 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 USP45Q70EL2 814 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 FKBP9P1Q75LS8 142 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 SLC44A2Q8IWA5 706 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 MED8Q96G25 268 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ACOX2Q99424 681 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ZNF670Q9BS34 389 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 C11orf49Q9H6J7 331 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PCDH18Q9HCL0 1135 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PTPRHQ9HD43 1115 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 DMAC2Q9NW81 257 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.86□□□□□ -0.194e-8■■■■■ 28.1
SCARB2-215ENST00000639145 hCG_1818297A0A087WSY0 165 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 SH3BGRLO75368 114 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PGAM1P18669 254 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PRPF39Q86UA1 669 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ZNF333Q96JL9 665 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ZCCHC2Q9C0B9 1178 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 HPS4Q9NQG7 708 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 NCKIPSDQ9NZQ3 722 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 DNAJC16Q9Y2G8 782 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 LIASO43766 372 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 CCNT2O60583 730 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 KATNA1O75449 491 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 CLTBP09497 229 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 CTPS1P17812 591 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 TMC3Q7Z5M5 1100 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PWWP2AQ96N64 755 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PRPF18Q99633 342 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ASB8Q9H765 288 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 REXO2Q9Y3B8 237 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 MYO7AQ13402 2215 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 CORO1AP31146 461 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 MAP2K2P36507 400 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ESRRGP62508 458 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 N4BP2L1Q5TBK1 243 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 EFL1Q7Z2Z2 1120 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 CTU1Q7Z7A3 348 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 KIF2BQ8N4N8 673 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 OTULINQ96BN8 352 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 ELOVL6Q9H5J4 265 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 STOML1Q9UBI4 398 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 PHTF1Q9UMS5 762 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 MTO1Q9Y2Z2 717 aaKnown RBP13.86□□□□□ -0.19
SCARB2-215ENST00000639145 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
SCARB2-215ENST00000639145 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 F2P00734 622 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 CYP2A6P11509 494 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-215ENST00000639145 BGNP21810 368 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 FAAP100Q0VG06 881 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 TMC5Q6UXY8 1006 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 TRIB2Q92519 343 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 CCDC126Q96EE4 140 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 CDHR5Q9HBB8 845 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 MYO1CO00159 1063 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 KLHL2O95198 593 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 C1RP00736 705 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 C8AP07357 584 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 TPBGLP0DKB5 382 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 GRK3P35626 688 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 PBX1P40424 430 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 SMARCB1Q12824 385 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 XYLT1Q86Y38 959 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 MIR1-1HGQ9H1L0 117 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 RNF186Q9NXI6 227 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 KIF17Q9P2E2 1029 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 DYRK1BQ9Y463 629 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 MYH13Q9UKX3 1938 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 STAU1O95793 577 aaKnown RBP13.85□□□□□ -0.19
SCARB2-215ENST00000639145 IL10P22301 178 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 CDC16Q13042 620 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 PKN2Q16513 984 aaKnown RBP13.85□□□□□ -0.19
SCARB2-215ENST00000639145 LRRC36Q1X8D7 754 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 HGSNATQ68CP4 663 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 POLNQ7Z5Q5 900 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 ARL14EPQ8N8R7 260 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-215ENST00000639145 ATP13A3Q9H7F0 1226 aa13.85□□□□□ -0.19
SCARB2-215ENST00000639145 COPS7BQ9H9Q2 264 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-215ENST00000639145 GIMAP4Q9NUV9 329 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms