RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 AGPAT1Q99943 283 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 RTN4Q9NQC3 1192 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 MPP6Q9NZW5 540 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 TBC1D30Q9Y2I9 924 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 OR51B4Q9Y5P0 310 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 CACNA1EQ15878 2313 aa17.22■□□□□ 0.35
CACNA1A-259ENST00000638114 A0A1W2PP55 124 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 DRGXA6NNA5 263 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 BCAT2O15382 392 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 OPHN1O60890 802 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 SRGAP2O75044 1071 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 RNASEH2AO75792 299 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 FSBPO95073 299 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 CALB1P05937 261 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 FERP16591 822 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 SLC8A1P32418 973 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 ELAVL3Q14576 367 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 C15orf59Q2T9L4 293 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 CCDC14Q49A88 953 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 N4BP2L1Q5TBK1 243 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 PHF13Q86YI8 300 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 FAM129BQ96TA1 746 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 OMDQ99983 421 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 SELENOOQ9BVL4 669 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 SERGEFQ9UGK8 458 aa17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-259ENST00000638114 IGLV3-10A0A075B6K4 115 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 C2CD4BA6NLJ0 364 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 GIPC1O14908 333 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 ENDOD1O94919 500 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 ADH1BP00325 375 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 IL1BP01584 269 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 KRT3P12035 628 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 CSRP1P21291 193 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 OR1E1P30953 314 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 KRT83P78385 493 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 GRIK2Q13002 908 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 ARL13BQ3SXY8 428 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 RAB6CQ53S08 254 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 C6orf118Q5T5N4 469 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 SETD3Q86TU7 594 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 DEFB124Q8NES8 71 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 FRS2Q8WU20 508 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 C2orf49Q9BVC5 232 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 RAB6CQ9H0N0 254 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 NEUROG2Q9H2A3 272 aa17.2■□□□□ 0.34
CACNA1A-259ENST00000638114 SYCE3A1L190 88 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 ATP9BO43861 1147 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 BNIP3LO60238 219 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 SNAP91O60641 907 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 C5AR1P21730 350 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 RFC1P35251 1148 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 PTPN9P43378 593 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 VASPP50552 380 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 GSCP56915 257 aaPredicted RBP17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 DLG2Q15700 870 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 KIAA0895LQ68EN5 471 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 Q6ZVU0 165 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 MON1BQ7L1V2 547 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 STRADAQ7RTN6 431 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 DSG4Q86SJ6 1040 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 AADATQ8N5Z0 425 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 C3orf20Q8ND61 904 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 OR8D1Q8WZ84 308 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 BAP1Q92560 729 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 BIRC7Q96CA5 298 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 PSMB7Q99436 277 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 FUCA2Q9BTY2 467 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 ZDHHC5Q9C0B5 715 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 ZYG11BQ9C0D3 744 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 SLC32A1Q9H598 525 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 FZD4Q9ULV1 537 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 SLCO1B1Q9Y6L6 691 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 DOCK4Q8N1I0 1966 aa17.19■□□□□ 0.34
CACNA1A-259ENST00000638114 A0A0D9SEW6 157 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 LRRC72A6NJI9 287 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 CEACAM1P13688 526 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 GPD1P21695 349 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 ADRA1BP35368 520 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 GALCP54803 685 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 ZNF252P-AS1Q0IIN9 211 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 SEMA3BQ13214 749 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 IQCB1Q15051 598 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 NCEH1Q6PIU2 408 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 DCAF4L2Q8NA75 395 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 ATP11CQ8NB49 1132 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 OR7D4Q8NG98 312 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 C1orf216Q8TAB5 229 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 FAM172AQ8WUF8 416 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 DNAAF2Q9NVR5 837 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 ADAMTS1Q9UHI8 967 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 VPS51Q9UID3 782 aa17.18■□□□□ 0.34
CACNA1A-259ENST00000638114 MYO6Q9UM54 1294 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms