RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 FSHRP23945 695 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 FDFT1P37268 417 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 WASHC5Q12768 1159 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 SERINC3Q13530 473 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 FAM153CQ494X1 144 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 MPPE1Q53F39 396 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 MPP7Q5T2T1 576 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 C6orf118Q5T5N4 469 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 RNASEH2BQ5TBB1 312 aaKnown RBP12.05□□□□□ -0.48
CLN6-223ENST00000637823 SYCE2Q6PIF2 218 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 ZNF783Q6ZMS7 281 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 ARHGEF18Q6ZSZ5 1173 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 CEP128Q6ZU80 1094 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 HOOK3Q86VS8 718 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 CIR1Q86X95 450 aaPredicted RBP12.05□□□□□ -0.48
CLN6-223ENST00000637823 BBS7Q8IWZ6 715 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 PPIL6Q8IXY8 311 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 CCDC110Q8TBZ0 833 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 ING5Q8WYH8 240 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 ZSWIM3Q96MP5 696 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 PRICKLE1Q96MT3 831 aaPredicted RBP12.05□□□□□ -0.48
CLN6-223ENST00000637823 SMG9Q9H0W8 520 aaKnown RBP12.05□□□□□ -0.48
CLN6-223ENST00000637823 KIF9Q9HAQ2 790 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 SEPT10Q9P0V9 454 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 TBC1D14Q9P2M4 693 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 FAM153AQ9UHL3 310 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 IPO11Q9UI26 975 aaKnown RBP12.05□□□□□ -0.48
CLN6-223ENST00000637823 CCL26Q9Y258 94 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 TBC1D30Q9Y2I9 924 aa12.05□□□□□ -0.48
CLN6-223ENST00000637823 RANBP2P49792 3224 aaKnown RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 ILVBLA1L0T0 632 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 KCNK1O00180 336 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 SLC9A3R1O14745 358 aaPredicted RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 ATP8B1O43520 1251 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 TBL1XO60907 577 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 JCHAINP01591 159 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 CCNB1P14635 433 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 PTPN3P26045 913 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 MAGEA6P43360 314 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 SGSHP51688 502 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 NRLP54845 237 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 IFI35P80217 286 aaPredicted RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 MLLT1Q03111 559 aaPredicted RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 GNA12Q03113 381 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 CBX2Q14781 532 aaPredicted RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 ZNF77Q15935 545 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 PARP6Q2NL67 630 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 ANO4Q32M45 955 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 TEX44Q53QW1 395 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 ARHGAP36Q6ZRI8 547 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 PID1Q7Z2X4 250 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 HDXQ7Z353 690 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 ARID3BQ8IVW6 561 aaPredicted RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 ZNF567Q8N184 647 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 CELF5Q8N6W0 485 aaKnown RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 TTC16Q8NEE8 873 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 DEPDC1BQ8WUY9 529 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 CPT1BQ92523 772 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 OTUB2Q96DC9 234 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 HMCESQ96FZ2 354 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 ETNK1Q9HBU6 452 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 RAB6BQ9NRW1 208 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 GDE1Q9NZC3 331 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 SHOC2Q9UQ13 582 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
CLN6-223ENST00000637823 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
CLN6-223ENST00000637823 CHADO15335 359 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 LUC7L3O95232 432 aaKnown RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 PRAMEF12O95522 483 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 CYBBP04839 570 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 RHOCP08134 193 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 ETFBP38117 255 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 HSPA9P38646 679 aaKnown RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 RENBPP51606 427 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 BASP1P80723 227 aaKnown RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 IL10RBQ08334 325 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 USP4Q13107 963 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 HNRNPDQ14103 355 aaKnown RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 SLMAPQ14BN4 828 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 ATAT1Q5SQI0 421 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 ITPRIPL1Q6GPH6 555 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 CES5AQ6NT32 575 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 POTEHQ6S545 545 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 MREGQ8N565 214 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 ZCCHC9Q8N567 271 aaKnown RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 NAT8LQ8N9F0 302 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 ZSCAN18Q8TBC5 510 aaPredicted RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 DDI1Q8WTU0 396 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 NSMCE1Q8WV22 266 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 MAML1Q92585 1016 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 PRCCQ92733 491 aaPredicted RBP12.03□□□□□ -0.48
CLN6-223ENST00000637823 EXOC4Q96A65 974 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 TEKT5Q96M29 485 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 IL12RB2Q99665 862 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 APOL5Q9BWW9 433 aa12.03□□□□□ -0.48
CLN6-223ENST00000637823 FRMD8Q9BZ67 464 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms