RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 THUMPD3Q9BV44 507 aaKnown RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 C2orf49Q9BVC5 232 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 C1QTNF7Q9BXJ2 289 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 YIPF3Q9GZM5 350 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 POMKQ9H5K3 350 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 COMMD8Q9NX08 183 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 BTBD7Q9P203 1132 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TRIM17Q9Y577 477 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 KLRG2A4D1S0 409 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 QSOX1O00391 747 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 NR5A2O00482 541 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 GJB6O95452 261 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 ACADMP11310 421 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TCN1P20061 433 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 RPL22P35268 128 aaKnown RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 BTKQ06187 659 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 CXCL17Q6UXB2 119 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 FAM35AQ86V20 835 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 HJURPQ8NCD3 748 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TSEN2Q8NCE0 465 aaKnown RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 RAD21L1Q9H4I0 556 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 ELOVL6Q9H5J4 265 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 PDZD7Q9H5P4 517 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 CDHR5Q9HBB8 845 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 CYP4F12Q9HCS2 524 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 H2AFY2Q9P0M6 372 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TRPM3Q9HCF6 1732 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 MGAT4DA6NG13 374 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TPP1O14773 563 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 B4GALT5O43286 388 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 SEC24DO94855 1032 aaPredicted RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 LTA4HP09960 611 aaKnown RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 CCNB1P14635 433 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 MBTD1Q05BQ5 628 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 CYP51A1Q16850 503 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TTMPQ5BVD1 217 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 ZFP1Q6P2D0 407 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 IFNEQ86WN2 208 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 XYLT1Q86Y38 959 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 TMCO5AQ8N6Q1 288 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 PGLYRP2Q96PD5 576 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 MRPL45Q9BRJ2 306 aaKnown RBP6.58□□□□□ -1.36
PDE4D-228ENST00000636120 ZNF112Q9UJU3 913 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 NAV1Q8NEY1 1877 aa6.58□□□□□ -1.36
PDE4D-228ENST00000636120 COL2A1P02458 1487 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 C15orf38-AP3S2A0A0A6YYH1 394 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ZSCAN9O15535 394 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 RGS14O43566 566 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TSPAN3O60637 253 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 DEAF1O75398 565 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 VAPBO95292 243 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TPH1P17752 444 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TPSB2P20231 275 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 RRM2P31350 389 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 SNRPD1P62314 119 aaKnown RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 DGKZQ13574 1117 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 STARD3Q14849 445 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TPSAB1Q15661 275 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 SH3D19Q5HYK7 790 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 PPP1R26Q5T8A7 1209 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 NPNTQ6UXI9 565 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ARPINQ7Z6K5 226 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TMEM139Q8IV31 216 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 MIER2Q8N344 545 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ADAM32Q8TC27 787 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 CERS2Q96G23 380 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 PLEKHA8Q96JA3 519 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 CDV3Q9UKY7 258 aaKnown RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 PDE2AO00408 941 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TSPAN1O60635 241 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 SASH3O75995 380 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 UBOX5O94941 541 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TBL3Q12788 808 aaKnown RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 GRM3Q14832 879 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ZC3H12BQ5HYM0 836 aaKnown RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 PRAMEF19Q5SWL8 479 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 HGSNATQ68CP4 663 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ANKS6Q68DC2 871 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 LAYNQ6UX15 382 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 C12orf50Q8NA57 414 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ABTB1Q969K4 478 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TMEM159Q96B96 161 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 CNTNAP1P78357 1384 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 LTBP3Q9NS15 1303 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 NOL4O94818 638 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ATP6V1G2O95670 118 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 CHKAP35790 457 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 ATP6V1E1P36543 226 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 RPL14P50914 215 aaKnown RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 IFI35P80217 286 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 LRRC74AQ0VAA2 488 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 FOXD4Q12950 439 aaPredicted RBP6.57□□□□□ -1.36
PDE4D-228ENST00000636120 TUSC3Q13454 348 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 PGS1Q32NB8 556 aa6.57□□□□□ -1.36
PDE4D-228ENST00000636120 INTS6LQ5JSJ4 861 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms