RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SLC5A2P31639 672 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ATICP31939 592 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 PTDSS1P48651 473 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SATB1Q01826 763 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TAP2Q03519 686 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ZNF844Q08AG5 666 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 NSUN2Q08J23 767 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 GRAPQ13588 217 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 EFR3AQ14156 821 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SIM2Q14190 667 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TAF5Q15542 800 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TAF12Q16514 161 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ZNF750Q32MQ0 723 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 MGAT5BQ3V5L5 792 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 CD300EQ496F6 205 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TMTC4Q5T4D3 741 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 INTS11Q5TA45 600 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 FAXCQ5TGI0 409 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 RAP1GAP2Q684P5 730 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 Q6ZTC4 211 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 PCGF5Q86SE9 256 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 MOGAT3Q86VF5 341 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 CCDC28AQ8IWP9 274 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SUGP1Q8IWZ8 645 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 NRACQ8N912 160 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 GRAPLQ8TC17 118 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 HMCESQ96FZ2 354 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 FAM227BQ96M60 508 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 CFAP53Q96M91 514 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 PPM1MQ96MI6 270 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC46A1Q96NT5 459 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 MED15Q96RN5 788 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TRIB1Q96RU8 372 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 PNKPQ96T60 521 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 PRPF18Q99633 342 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 FAM167BQ9BTA0 163 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 DDX23Q9BUQ8 820 aaKnown RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 GLIS2Q9BZE0 524 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 TP63Q9H3D4 680 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 SAYSD1Q9NPB0 183 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 MIS18AQ9NYP9 233 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 KIF17Q9P2E2 1029 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 POLLQ9UGP5 575 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ZMYND8Q9ULU4 1186 aaPredicted RBP2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 NEU2Q9Y3R4 380 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 DTNAQ9Y4J8 743 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 AFG3L2Q9Y4W6 797 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 RAD54BQ9Y620 910 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 CDY1Q9Y6F8 540 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 ZSWIM8A7E2V4 1837 aa2.81□□□□□ -1.96
SMARCB1-208ENST00000634926 MED23Q9ULK4 1368 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ASTN2O75129 1339 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 SH3TC1Q8TE82 1336 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ADGRA2Q96PE1 1338 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 A0A0B4J269 797 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 CCDC195A0A1B0GUA6 201 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 A0A1W2PS29 197 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 RRN3P2A6NIE6 340 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 J3KRW8 73 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 EYA2O00167 538 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 GTPBP1O00178 669 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PSMD14O00487 310 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PPIP5K2O43314 1243 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 EPB41L2O43491 1005 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ASNA1O43681 348 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 RRP9O43818 475 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 CELF2O95319 508 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 RHOP08100 348 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 MYL6BP14649 208 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PECAM1P16284 738 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 RPS12P25398 132 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 MST1P26927 711 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PCSK6P29122 969 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 MAN1A1P33908 653 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 GCLCP48506 637 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PXNP49023 591 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 DGKEP52429 567 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PNLIPRP1P54315 467 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 LOXL3P58215 753 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 MC2RQ01718 297 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 LMOD3Q0VAK6 560 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 DDX10Q13206 875 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 FHL3Q13643 280 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 LAMB3Q13751 1172 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TIGD6Q17RP2 521 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 KRT24Q2M2I5 525 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC4A8Q2Y0W8 1093 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ZIK1Q3SY52 487 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TAPT1Q6NXT6 567 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TAF2Q6P1X5 1199 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 KLHL17Q6TDP4 642 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 KIF6Q6ZMV9 814 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TMPRSS9Q7Z410 1059 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PPP1R42Q7Z4L9 355 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ZNF280BQ86YH2 543 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 HERC6Q8IVU3 1022 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 CCDC117Q8IWD4 279 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PSD4Q8NDX1 1056 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PPHLN1Q8NEY8 458 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms