RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 ARL4CP56559 192 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 SMAD3P84022 425 aaKnown RBP11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 ZXDBP98169 803 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 PDIA2Q13087 525 aaKnown RBP11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 MTA1Q13330 715 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 SEMA5AQ13591 1074 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 HIF1AQ16665 826 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 PABPC1LQ4VXU2 614 aaKnown RBP11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 C4orf22Q6V702 233 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 CENPUQ71F23 418 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 TRMT10CQ7L0Y3 403 aaKnown RBP11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 UMODL1-AS1Q8N2C9 162 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 LZTR1Q8N653 840 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 SHKBP1Q8TBC3 707 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 USP33Q8TEY7 942 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 GDPD5Q8WTR4 605 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 TCEAL4Q96EI5 215 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 HMCESQ96FZ2 354 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 ZNF419Q96HQ0 510 aaPredicted RBP11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 GCNAQ96QF7 691 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 SH3GL2Q99962 352 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 FERMT1Q9BQL6 677 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 WDR83Q9BRX9 315 aaKnown RBP11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 PBX4Q9BYU1 374 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 TSPYL1Q9H0U9 437 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 ATXN3LQ9H3M9 355 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 ASAH2Q9NR71 780 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 CPQQ9Y646 472 aa11.08□□□□□ -0.64
AP001065.3-201ENST00000622854 NUP210Q8TEM1 1887 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 RASA4BC9J798 803 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 MTSS1O43312 755 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 RASA4O43374 803 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 GREM1O60565 184 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 TSPAN3O60637 253 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 MAFKO60675 156 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ZNF189O75820 626 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 TTC4O95801 387 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 JCHAINP01591 159 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 NUDT17P0C025 328 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 HDCP19113 662 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 TPSB2P20231 275 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 CDC25CP30307 473 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 CD68P34810 354 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 FDFT1P37268 417 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 RPS24P62847 133 aaKnown RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 NTHL1P78549 312 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 GPS2Q13227 327 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 SLC29A2Q14542 456 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 TPSAB1Q15661 275 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 KYNUQ16719 465 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 BBS9Q3SYG4 887 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 C5orf22Q49AR2 442 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 CEP85LQ5SZL2 805 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ACBD5Q5T8D3 534 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 CEP128Q6ZU80 1094 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ZNF534Q76KX8 674 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 RBM23Q86U06 439 aaKnown RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 RELL1Q8IUW5 271 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ANKMY2Q8IV38 441 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 TTC16Q8NEE8 873 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ZSCAN18Q8TBC5 510 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ARNTL2Q8WYA1 636 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 EXOC4Q96A65 974 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 AZIN2Q96A70 460 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ARL8AQ96BM9 186 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 AGAP3Q96P47 875 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 IGSF9Q9P2J2 1179 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 DNMT3BQ9UBC3 853 aaKnown RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 ZFP37Q9Y6Q3 630 aaPredicted RBP11.07□□□□□ -0.64
AP001065.3-201ENST00000622854 TRAV19A0A0A6YYK7 116 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 E7ESA3 106 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 E7EVH7 732 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 SMAPO00193 183 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 ALOX15BO15296 676 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 RNF40O75150 1001 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 AVILO75366 819 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 MOSPD3O75425 235 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 CKMP06732 381 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 RHOP08100 348 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 NFKB1P19838 968 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 CCNCP24863 283 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 MAPKAPK2P49137 400 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 NUMBP49757 651 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 NDST2P52849 883 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 EPHA5P54756 1037 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 IFI35P80217 286 aaPredicted RBP11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 SLC7A9P82251 487 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 IFFO1Q0D2I5 559 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 TEAD2Q15562 447 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 SLC5A9Q2M3M2 681 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 PARP6Q2NL67 630 aa11.06□□□□□ -0.64
AP001065.3-201ENST00000622854 HSP90B2PQ58FF3 399 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms